EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0021930 (Gene tree)
Gene ID: -
Gene Symbol: Arl6
Alias: 1110018H24Rik|2210411E14Rik|ARL6|BBS3|Bbs3
Full Name: ADP-ribosylation factor-like 6
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 26907 bases
Position: chr16:56333435-56360341
Accession: 1927136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0044208	MMR_HSR1	PF01926.23	3.6e-06	1	1
MGP_PWKPhJ_P0044209	MMR_HSR1	PF01926.23	4e-06	1	1
MGP_PWKPhJ_P0044210	MMR_HSR1	PF01926.23	4e-06	1	1
MGP_PWKPhJ_P0044211	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0044210	-	893	-	MGP_PWKPhJ_P0044210	199 (aa)	-	-
MGP_PWKPhJ_T0044211	-	829	-	MGP_PWKPhJ_P0044211	200 (aa)	-	-
MGP_PWKPhJ_T0044209	-	1572	-	MGP_PWKPhJ_P0044209	199 (aa)	-	-
MGP_PWKPhJ_T0044208	-	1714	XM_006522398	MGP_PWKPhJ_P0044208	192 (aa)	XP_006522461	O88848

Gene Model

Click here to download MGP_PWKPhJ_G0021930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0021930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0021930	Arl6	97	36.269	MGP_PWKPhJ_G0018767	Arl4a	92	36.269
MGP_PWKPhJ_G0021930	Arl6	92	34.737	MGP_PWKPhJ_G0015423	Arl4c	94	34.737
MGP_PWKPhJ_G0021930	Arl6	86	30.909	MGP_PWKPhJ_G0029905	Arl8b	82	30.909
MGP_PWKPhJ_G0021930	Arl6	99	35.079	MGP_PWKPhJ_G0024156	Arl3	99	35.079
MGP_PWKPhJ_G0021930	Arl6	90	34.682	MGP_PWKPhJ_G0029320	Arf5	91	34.682
MGP_PWKPhJ_G0021930	Arl6	96	39.459	MGP_PWKPhJ_G0021306	Arf3	96	39.459
MGP_PWKPhJ_G0021930	Arl6	98	34.392	MGP_PWKPhJ_G0023703	Arl2	97	34.392
MGP_PWKPhJ_G0021930	Arl6	62	30.000	MGP_PWKPhJ_G0019590	Arl10	53	30.000
MGP_PWKPhJ_G0021930	Arl6	86	30.303	MGP_PWKPhJ_G0015652	Arl8a	82	30.303
MGP_PWKPhJ_G0021930	Arl6	56	35.135	MGP_PWKPhJ_G0017367	Sar1b	52	35.135
MGP_PWKPhJ_G0021930	Arl6	90	37.791	MGP_PWKPhJ_G0024313	Arl5b	92	38.095
MGP_PWKPhJ_G0021930	Arl6	88	34.320	MGP_PWKPhJ_G0016742	Arl1	95	34.270
MGP_PWKPhJ_G0021930	Arl6	88	32.941	MGP_PWKPhJ_G0020441	Arl11	91	32.941
MGP_PWKPhJ_G0021930	Arl6	98	36.842	MGP_PWKPhJ_G0018127	Arl5c	99	36.842
MGP_PWKPhJ_G0021930	Arl6	57	32.203	MGP_PWKPhJ_G0025931	Arfrp1	93	32.203
MGP_PWKPhJ_G0021930	Arl6	93	30.851	MGP_PWKPhJ_G0026192	Arl14	91	30.851