EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0022839 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 35868 bases
Position: chr17:51718408-51754275
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0047532	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0047532	-	2083	-	MGP_PWKPhJ_P0047532	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_PWKPhJ_G0022839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0022839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0022839	Rab5a	82	31.667	MGP_PWKPhJ_G0031945	Hras	94	31.667
MGP_PWKPhJ_G0022839	Rab5a	75	41.615	MGP_PWKPhJ_G0026914	Rab2a	97	36.667
MGP_PWKPhJ_G0022839	Rab5a	95	42.718	MGP_PWKPhJ_G0033895	Rab6b	98	42.718
MGP_PWKPhJ_G0022839	Rab5a	90	41.667	MGP_PWKPhJ_G0022511	Rab11b	94	41.667
MGP_PWKPhJ_G0022839	Rab5a	90	46.429	MGP_PWKPhJ_G0023645	Rab1b	96	46.429
MGP_PWKPhJ_G0022839	Rab5a	78	31.737	MGP_PWKPhJ_G0030381	Rasl2-9	76	31.737
MGP_PWKPhJ_G0022839	Rab5a	90	40.816	MGP_PWKPhJ_G0023083	Rab18	93	40.816
MGP_PWKPhJ_G0022839	Rab5a	81	37.989	MGP_PWKPhJ_G0022939	Rab12	74	37.989
MGP_PWKPhJ_G0022839	Rab5a	91	47.449	MGP_PWKPhJ_G0022930	Rab31	98	47.449
MGP_PWKPhJ_G0022839	Rab5a	90	43.814	MGP_PWKPhJ_G0017160	Rab1a	95	43.814
MGP_PWKPhJ_G0022839	Rab5a	80	31.667	MGP_PWKPhJ_G0030278	Kras	94	31.667
MGP_PWKPhJ_G0022839	Rab5a	95	41.546	MGP_PWKPhJ_G0031319	Rab6a	98	41.546
MGP_PWKPhJ_G0022839	Rab5a	90	35.323	MGP_PWKPhJ_G0034766	Rab9b	97	35.323
MGP_PWKPhJ_G0022839	Rab5a	74	38.125	MGP_PWKPhJ_G0015037	Rab23	67	38.125
MGP_PWKPhJ_G0022839	Rab5a	74	40.881	MGP_PWKPhJ_G0018926	Rab15	75	40.881
MGP_PWKPhJ_G0022839	Rab5a	73	32.500	MGP_PWKPhJ_G0017846	Rab34	62	32.500
MGP_PWKPhJ_G0022839	Rab5a	81	43.678	MGP_PWKPhJ_G0031259	Rab30	86	43.678
MGP_PWKPhJ_G0022839	Rab5a	74	35.928	MGP_PWKPhJ_G0021239	Rabl2	72	35.928
MGP_PWKPhJ_G0022839	Rab5a	55	30.159	MGP_PWKPhJ_G0018767	Arl4a	60	30.159
MGP_PWKPhJ_G0022839	Rab5a	56	33.065	MGP_PWKPhJ_G0029905	Arl8b	63	33.065
MGP_PWKPhJ_G0022839	Rab5a	74	41.463	MGP_PWKPhJ_G0029808	Rab7	99	47.436
MGP_PWKPhJ_G0022839	Rab5a	91	41.951	MGP_PWKPhJ_G0033651	Rab11a	88	48.148
MGP_PWKPhJ_G0022839	Rab5a	75	41.566	MGP_PWKPhJ_G0034357	Rab33a	70	41.566
MGP_PWKPhJ_G0022839	Rab5a	91	30.244	MGP_PWKPhJ_G0016465	Rab36	77	30.244
MGP_PWKPhJ_G0022839	Rab5a	73	33.121	MGP_PWKPhJ_G0028189	Rheb	85	33.121
MGP_PWKPhJ_G0022839	Rab5a	90	40.704	MGP_PWKPhJ_G0026295	Rab25	93	40.704
MGP_PWKPhJ_G0022839	Rab5a	95	41.951	MGP_PWKPhJ_G0018439	Rab37	93	41.951
MGP_PWKPhJ_G0022839	Rab5a	60	32.576	MGP_PWKPhJ_G0015652	Arl8a	66	32.576
MGP_PWKPhJ_G0022839	Rab5a	78	41.916	MGP_PWKPhJ_G0020303	Rab2b	79	44.079
MGP_PWKPhJ_G0022839	Rab5a	100	87.500	MGP_PWKPhJ_G0018235	Rab5c	100	87.500
MGP_PWKPhJ_G0022839	Rab5a	75	36.585	MGP_PWKPhJ_G0034524	Rab39b	77	36.585
MGP_PWKPhJ_G0022839	Rab5a	90	34.328	MGP_PWKPhJ_G0034923	Rab9	91	34.328
MGP_PWKPhJ_G0022839	Rab5a	77	40.351	MGP_PWKPhJ_G0026098	Rab33b	75	40.351
MGP_PWKPhJ_G0022839	Rab5a	90	49.231	MGP_PWKPhJ_G0025872	Rab22a	98	49.231
MGP_PWKPhJ_G0022839	Rab5a	89	38.614	MGP_PWKPhJ_G0024594	Rab14	94	38.614