EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0022939 (Gene tree)
Gene ID: -
Gene Symbol: Rab12
Alias: 2900054P15Rik|AW555448|C77700
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 25960 bases
Position: chr17:64665778-64691737
Accession: 894284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0047782	MMR_HSR1	PF01926.23	3.8e-07	1	1
MGP_PWKPhJ_P0047783	MMR_HSR1	PF01926.23	6.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0047783	-	2136	-	MGP_PWKPhJ_P0047783	305 (aa)	-	-
MGP_PWKPhJ_T0047782	-	2089	-	MGP_PWKPhJ_P0047782	243 (aa)	-	P35283
MGP_PWKPhJ_T0047786	-	665	-	-	- (aa)	-	-
MGP_PWKPhJ_T0047785	-	381	-	-	- (aa)	-	-
MGP_PWKPhJ_T0047784	-	629	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0022939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0022939's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0022939	Rab12	74	37.989	MGP_PWKPhJ_G0022839	Rab5a	81	37.989
MGP_PWKPhJ_G0022939	Rab12	63	31.373	MGP_PWKPhJ_G0030278	Kras	87	31.325
MGP_PWKPhJ_G0022939	Rab12	65	41.104	MGP_PWKPhJ_G0034357	Rab33a	68	41.104
MGP_PWKPhJ_G0022939	Rab12	79	36.869	MGP_PWKPhJ_G0026098	Rab33b	83	36.224
MGP_PWKPhJ_G0022939	Rab12	66	37.195	MGP_PWKPhJ_G0017846	Rab34	75	33.824
MGP_PWKPhJ_G0022939	Rab12	82	39.500	MGP_PWKPhJ_G0020303	Rab2b	80	47.097
MGP_PWKPhJ_G0022939	Rab12	67	49.697	MGP_PWKPhJ_G0023083	Rab18	79	49.697
MGP_PWKPhJ_G0022939	Rab12	74	47.778	MGP_PWKPhJ_G0031259	Rab30	89	47.253
MGP_PWKPhJ_G0022939	Rab12	68	35.119	MGP_PWKPhJ_G0015037	Rab23	69	35.119
MGP_PWKPhJ_G0022939	Rab12	64	34.194	MGP_PWKPhJ_G0021239	Rabl2	67	34.194
MGP_PWKPhJ_G0022939	Rab12	65	37.107	MGP_PWKPhJ_G0025872	Rab22a	81	37.107
MGP_PWKPhJ_G0022939	Rab12	86	43.396	MGP_PWKPhJ_G0018926	Rab15	88	45.213
MGP_PWKPhJ_G0022939	Rab12	63	38.217	MGP_PWKPhJ_G0029808	Rab7	90	50.704
MGP_PWKPhJ_G0022939	Rab12	86	36.321	MGP_PWKPhJ_G0024594	Rab14	96	40.000
MGP_PWKPhJ_G0022939	Rab12	74	42.308	MGP_PWKPhJ_G0026914	Rab2a	85	42.308
MGP_PWKPhJ_G0022939	Rab12	84	37.736	MGP_PWKPhJ_G0022511	Rab11b	76	41.916
MGP_PWKPhJ_G0022939	Rab12	65	40.252	MGP_PWKPhJ_G0031319	Rab6a	76	40.252
MGP_PWKPhJ_G0022939	Rab12	68	42.262	MGP_PWKPhJ_G0034524	Rab39b	78	42.262
MGP_PWKPhJ_G0022939	Rab12	83	30.583	MGP_PWKPhJ_G0034923	Rab9	78	34.132
MGP_PWKPhJ_G0022939	Rab12	65	30.818	MGP_PWKPhJ_G0028189	Rheb	85	30.818
MGP_PWKPhJ_G0022939	Rab12	51	31.159	MGP_PWKPhJ_G0024313	Arl5b	68	31.159
MGP_PWKPhJ_G0022939	Rab12	78	46.561	MGP_PWKPhJ_G0017160	Rab1a	82	50.296
MGP_PWKPhJ_G0022939	Rab12	70	49.704	MGP_PWKPhJ_G0023645	Rab1b	84	49.704
MGP_PWKPhJ_G0022939	Rab12	64	38.462	MGP_PWKPhJ_G0022930	Rab31	79	38.462
MGP_PWKPhJ_G0022939	Rab12	64	31.210	MGP_PWKPhJ_G0033871	Mras	80	31.548
MGP_PWKPhJ_G0022939	Rab12	84	37.073	MGP_PWKPhJ_G0026295	Rab25	79	40.588
MGP_PWKPhJ_G0022939	Rab12	66	43.210	MGP_PWKPhJ_G0018439	Rab37	75	43.210
MGP_PWKPhJ_G0022939	Rab12	65	39.623	MGP_PWKPhJ_G0033895	Rab6b	76	39.623
MGP_PWKPhJ_G0022939	Rab12	51	31.250	MGP_PWKPhJ_G0018127	Arl5c	69	31.250
MGP_PWKPhJ_G0022939	Rab12	90	36.000	MGP_PWKPhJ_G0018235	Rab5c	86	38.806
MGP_PWKPhJ_G0022939	Rab12	67	35.329	MGP_PWKPhJ_G0034766	Rab9b	83	35.329
MGP_PWKPhJ_G0022939	Rab12	84	37.799	MGP_PWKPhJ_G0033651	Rab11a	90	43.796