EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0023078 (Gene tree)
Gene ID: -
Gene Symbol: Zeb1
Alias: 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1
Full Name: zinc finger E-box binding homeobox 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 187038 bases
Position: chr18:2386381-2573418
Accession: 1344313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0048270	zf-C2H2	PF00096.26	3.3e-24	1	6
MGP_PWKPhJ_P0048270	zf-C2H2	PF00096.26	3.3e-24	2	6
MGP_PWKPhJ_P0048270	zf-C2H2	PF00096.26	3.3e-24	3	6
MGP_PWKPhJ_P0048270	zf-C2H2	PF00096.26	3.3e-24	4	6
MGP_PWKPhJ_P0048270	zf-C2H2	PF00096.26	3.3e-24	5	6
MGP_PWKPhJ_P0048270	zf-C2H2	PF00096.26	3.3e-24	6	6
MGP_PWKPhJ_P0048273	zf-C2H2	PF00096.26	1.5e-17	1	4
MGP_PWKPhJ_P0048273	zf-C2H2	PF00096.26	1.5e-17	2	4
MGP_PWKPhJ_P0048273	zf-C2H2	PF00096.26	1.5e-17	3	4
MGP_PWKPhJ_P0048273	zf-C2H2	PF00096.26	1.5e-17	4	4
MGP_PWKPhJ_P0048270	zf-met	PF12874.7	2.2e-08	1	2
MGP_PWKPhJ_P0048270	zf-met	PF12874.7	2.2e-08	2	2
MGP_PWKPhJ_P0048273	zf-met	PF12874.7	5.2e-06	1	2
MGP_PWKPhJ_P0048273	zf-met	PF12874.7	5.2e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0048272	-	1189	-	MGP_PWKPhJ_P0048272	10 (aa)	-	-
MGP_PWKPhJ_T0048273	-	853	-	MGP_PWKPhJ_P0048273	283 (aa)	-	-
MGP_PWKPhJ_T0048270	-	5830	XM_006525770	MGP_PWKPhJ_P0048270	1116 (aa)	XP_006525832	Q64318
MGP_PWKPhJ_T0048271	-	1869	-	-	- (aa)	-	-
MGP_PWKPhJ_T0048276	-	774	-	MGP_PWKPhJ_P0048276	154 (aa)	-	-
MGP_PWKPhJ_T0048277	-	819	-	-	- (aa)	-	-
MGP_PWKPhJ_T0048274	-	1438	-	MGP_PWKPhJ_P0048274	95 (aa)	-	-
MGP_PWKPhJ_T0048275	-	790	-	-	- (aa)	-	-
MGP_PWKPhJ_T0048278	-	2464	-	-	- (aa)	-	-
MGP_PWKPhJ_T0048279	-	1604	-	-	- (aa)	-	-
MGP_PWKPhJ_T0048281	-	2662	-	-	- (aa)	-	-
MGP_PWKPhJ_T0048280	-	5786	-	MGP_PWKPhJ_P0048280	1109 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0023078	Zeb1	51	33.913	MGP_PWKPhJ_G0017438	Zfp672	90	37.500
MGP_PWKPhJ_G0023078	Zeb1	51	37.931	MGP_PWKPhJ_G0029981	Zfp637	50	48.684
MGP_PWKPhJ_G0023078	Zeb1	100	69.340	MGP_PWKPhJ_G0024656	Zeb2	93	60.294