EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0023321 (Gene tree)
Gene ID: -
Gene Symbol: Pabpc2
Alias: Pabp|Pabp+|Pabp2
Full Name: poly(A) binding protein%2C cytoplasmic 2
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 2587 bases
Position: chr18:36811751-36814337
Accession: 1349723
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0048933	PABP	PF00658.18	1.9e-21	1	1
MGP_PWKPhJ_P0048933	RRM_5	PF13893.6	8.7e-10	1	2
MGP_PWKPhJ_P0048933	RRM_5	PF13893.6	8.7e-10	2	2
MGP_PWKPhJ_P0048933	RRM_1	PF00076.22	2.2e-86	1	4
MGP_PWKPhJ_P0048933	RRM_1	PF00076.22	2.2e-86	2	4
MGP_PWKPhJ_P0048933	RRM_1	PF00076.22	2.2e-86	3	4
MGP_PWKPhJ_P0048933	RRM_1	PF00076.22	2.2e-86	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0048933	-	2587	-	MGP_PWKPhJ_P0048933	629 (aa)	-	Q62029

Gene Model

Click here to download MGP_PWKPhJ_G0023321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0023321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0023321	Pabpc2	59	36.145	MGP_PWKPhJ_G0027303	Elavl2	89	36.145
MGP_PWKPhJ_G0023321	Pabpc2	50	38.554	MGP_PWKPhJ_G0016671	Celf5	68	38.554
MGP_PWKPhJ_G0023321	Pabpc2	59	34.667	MGP_PWKPhJ_G0028817	Rbm19	60	34.667
MGP_PWKPhJ_G0023321	Pabpc2	100	61.129	MGP_PWKPhJ_G0020798	Pabpc1	83	88.208
MGP_PWKPhJ_G0023321	Pabpc2	99	70.295	MGP_PWKPhJ_G0022132	Pabpc6	99	70.451
MGP_PWKPhJ_G0023321	Pabpc2	59	60.955	MGP_PWKPhJ_G0034702	Pabpc5	96	61.111
MGP_PWKPhJ_G0023321	Pabpc2	98	57.325	MGP_PWKPhJ_G0025746	Pabpc1l	99	57.325
MGP_PWKPhJ_G0023321	Pabpc2	57	68.098	MGP_PWKPhJ_G0026090	Pabpc4l	95	68.098
MGP_PWKPhJ_G0023321	Pabpc2	61	34.940	MGP_PWKPhJ_G0033183	Elavl3	90	34.940
MGP_PWKPhJ_G0023321	Pabpc2	59	34.940	MGP_PWKPhJ_G0027434	Elavl4	88	34.940
MGP_PWKPhJ_G0023321	Pabpc2	57	35.443	MGP_PWKPhJ_G0029778	Tia1	95	33.835