EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0023354 (Gene tree)
Gene ID: -
Gene Symbol: Ythdc2
Alias: 3010002F02Rik|BC037178
Full Name: YTH domain containing 2
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 160880 bases
Position: chr18:41830695-41991574
Accession: 2448561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0048996	R3H	PF01424.22	1.5e-10	1	1
MGP_PWKPhJ_P0048996	DEAD	PF00270.29	2.6e-09	1	1
MGP_PWKPhJ_P0048996	YTH	PF04146.15	1.3e-42	1	1
MGP_PWKPhJ_P0048996	HA2	PF04408.23	6.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0048997	-	884	-	MGP_PWKPhJ_P0048997	219 (aa)	-	-
MGP_PWKPhJ_T0048996	-	7105	-	MGP_PWKPhJ_P0048996	1445 (aa)	-	B2RR83
MGP_PWKPhJ_T0049000	-	437	-	-	- (aa)	-	-
MGP_PWKPhJ_T0048999	-	4180	-	MGP_PWKPhJ_P0048999	585 (aa)	-	-
MGP_PWKPhJ_T0048998	-	1328	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0023354's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0023354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0023354	Ythdc2	90	35.912	MGP_PWKPhJ_G0015729	Dhx9	51	53.425
MGP_PWKPhJ_G0023354	Ythdc2	69	31.785	MGP_PWKPhJ_G0028375	Dhx15	80	41.262
MGP_PWKPhJ_G0023354	Ythdc2	89	32.714	MGP_PWKPhJ_G0019954	Dhx29	55	46.491
MGP_PWKPhJ_G0023354	Ythdc2	70	35.392	MGP_PWKPhJ_G0034038	Dhx30	55	47.236
MGP_PWKPhJ_G0023354	Ythdc2	72	36.504	MGP_PWKPhJ_G0023009	Dhx57	56	50.800
MGP_PWKPhJ_G0023354	Ythdc2	88	36.015	MGP_PWKPhJ_G0026159	Dhx36	80	41.667