EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0023625 (Gene tree)
Gene ID: -
Gene Symbol: Rbm4
Alias: 4921506I22Rik|Lark1|Mlark|Rbm4a|lark
Full Name: RNA binding motif protein 4
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 9732 bases
Position: chr19:1617483-1627214
Accession: 1100865
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0049890	zf-CCHC	PF00098.23	3.5e-07	1	1
MGP_PWKPhJ_P0049890	RRM_5	PF13893.6	5.2e-08	1	2
MGP_PWKPhJ_P0049890	RRM_5	PF13893.6	5.2e-08	2	2
MGP_PWKPhJ_P0049893	RRM_5	PF13893.6	3.6e-06	1	1
MGP_PWKPhJ_P0049893	RRM_1	PF00076.22	4.2e-40	1	2
MGP_PWKPhJ_P0049893	RRM_1	PF00076.22	4.2e-40	2	2
MGP_PWKPhJ_P0049890	RRM_1	PF00076.22	9.8e-40	1	2
MGP_PWKPhJ_P0049890	RRM_1	PF00076.22	9.8e-40	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0049894	-	2762	-	-	- (aa)	-	-
MGP_PWKPhJ_T0049890	-	2697	-	MGP_PWKPhJ_P0049890	390 (aa)	-	Q8C7Q4
MGP_PWKPhJ_T0049893	-	1105	-	MGP_PWKPhJ_P0049893	172 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0023625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0023625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0023625	Rbm4	93	73.497	MGP_PWKPhJ_G0023623	Gm21992	100	73.497
MGP_PWKPhJ_G0023625	Rbm4	58	77.778	MGP_PWKPhJ_G0023624	Rbm4b	96	78.667
MGP_PWKPhJ_G0023625	Rbm4	83	52.941	MGP_PWKPhJ_G0023626	Rbm14	94	54.545
MGP_PWKPhJ_G0023625	Rbm4	58	31.532	MGP_PWKPhJ_G0029778	Tia1	83	31.532
MGP_PWKPhJ_G0023625	Rbm4	59	30.088	MGP_PWKPhJ_G0031816	Tial1	84	30.088
MGP_PWKPhJ_G0023625	Rbm4	59	33.654	MGP_PWKPhJ_G0020402	Pspc1	93	36.066