EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0023955 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 244965 bases
Position: chr19:23235922-23480886
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0050825	ResIII	PF04851.15	3.9e-08	1	1
MGP_PWKPhJ_P0050826	ResIII	PF04851.15	4e-08	1	1
MGP_PWKPhJ_P0050829	ResIII	PF04851.15	2.1e-06	1	1
MGP_PWKPhJ_P0050829	BRK	PF07533.16	4.4e-17	1	1
MGP_PWKPhJ_P0050825	BRK	PF07533.16	4.5e-17	1	1
MGP_PWKPhJ_P0050826	BRK	PF07533.16	4.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0050839	-	879	-	MGP_PWKPhJ_P0050839	276 (aa)	-	-
MGP_PWKPhJ_T0050838	-	788	-	MGP_PWKPhJ_P0050838	224 (aa)	-	-
MGP_PWKPhJ_T0050832	-	660	-	-	- (aa)	-	-
MGP_PWKPhJ_T0050828	-	5967	-	MGP_PWKPhJ_P0050828	1585 (aa)	-	-
MGP_PWKPhJ_T0050829	-	4557	-	MGP_PWKPhJ_P0050829	1518 (aa)	-	-
MGP_PWKPhJ_T0050826	-	5819	-	MGP_PWKPhJ_P0050826	1594 (aa)	-	-
MGP_PWKPhJ_T0050827	-	5870	-	MGP_PWKPhJ_P0050827	1503 (aa)	-	-
MGP_PWKPhJ_T0050833	-	1584	-	-	- (aa)	-	-
MGP_PWKPhJ_T0050825	-	5815	XM_006527281	MGP_PWKPhJ_P0050825	1576 (aa)	XP_006527344	A0A140LHE2
MGP_PWKPhJ_T0050835	-	426	-	-	- (aa)	-	-
MGP_PWKPhJ_T0050834	-	867	-	-	- (aa)	-	-
MGP_PWKPhJ_T0050837	-	942	-	MGP_PWKPhJ_P0050837	254 (aa)	-	-
MGP_PWKPhJ_T0050836	-	929	-	MGP_PWKPhJ_P0050836	254 (aa)	-	-
MGP_PWKPhJ_T0050831	-	639	-	MGP_PWKPhJ_P0050831	171 (aa)	-	-
MGP_PWKPhJ_T0050830	-	3231	-	MGP_PWKPhJ_P0050830	1032 (aa)	-	-
MGP_PWKPhJ_T0050840	-	1836	-	MGP_PWKPhJ_P0050840	236 (aa)	-	-
MGP_PWKPhJ_T0050841	-	835	-	MGP_PWKPhJ_P0050841	235 (aa)	-	-
MGP_PWKPhJ_T0050842	-	494	-	MGP_PWKPhJ_P0050842	83 (aa)	-	-
MGP_PWKPhJ_T0050843	-	1438	-	MGP_PWKPhJ_P0050843	113 (aa)	-	-
MGP_PWKPhJ_T0050844	-	946	-	MGP_PWKPhJ_P0050844	119 (aa)	-	-
MGP_PWKPhJ_T0050845	-	736	-	MGP_PWKPhJ_P0050845	119 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0023955	Smarca2	95	90.909	MGP_PWKPhJ_G0033168	Smarca4	96	76.018