EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0024313 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 33518 bases
Position: chr2:11876032-11909549
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0052153	MMR_HSR1	PF01926.23	8.6e-07	1	1
MGP_PWKPhJ_P0052155	MMR_HSR1	PF01926.23	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0052153	-	6945	XM_017319316	MGP_PWKPhJ_P0052153	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_PWKPhJ_T0052155	-	6993	-	MGP_PWKPhJ_P0052155	180 (aa)	-	-
MGP_PWKPhJ_T0052156	-	1037	-	MGP_PWKPhJ_P0052156	40 (aa)	-	-
MGP_PWKPhJ_T0052157	-	476	-	MGP_PWKPhJ_P0052157	35 (aa)	-	-
MGP_PWKPhJ_T0052158	-	780	-	MGP_PWKPhJ_P0052158	30 (aa)	-	-
MGP_PWKPhJ_T0052159	-	3210	-	-	- (aa)	-	-
MGP_PWKPhJ_T0052160	-	706	-	MGP_PWKPhJ_P0052160	56 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0024313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0024313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0024313	Arl5b	93	40.000	MGP_PWKPhJ_G0020441	Arl11	91	40.000
MGP_PWKPhJ_G0024313	Arl5b	84	33.562	MGP_PWKPhJ_G0015652	Arl8a	78	33.553
MGP_PWKPhJ_G0024313	Arl5b	83	30.667	MGP_PWKPhJ_G0029905	Arl8b	78	30.667
MGP_PWKPhJ_G0024313	Arl5b	91	51.613	MGP_PWKPhJ_G0016742	Arl1	98	50.292
MGP_PWKPhJ_G0024313	Arl5b	94	43.373	MGP_PWKPhJ_G0018767	Arl4a	85	43.787
MGP_PWKPhJ_G0024313	Arl5b	96	37.500	MGP_PWKPhJ_G0026192	Arl14	90	37.500
MGP_PWKPhJ_G0024313	Arl5b	92	38.095	MGP_PWKPhJ_G0021930	Arl6	90	37.791
MGP_PWKPhJ_G0024313	Arl5b	99	43.094	MGP_PWKPhJ_G0024156	Arl3	99	43.094
MGP_PWKPhJ_G0024313	Arl5b	99	44.444	MGP_PWKPhJ_G0029320	Arf5	100	44.444
MGP_PWKPhJ_G0024313	Arl5b	98	49.718	MGP_PWKPhJ_G0021306	Arf3	98	49.718
MGP_PWKPhJ_G0024313	Arl5b	65	34.211	MGP_PWKPhJ_G0019590	Arl10	55	34.211
MGP_PWKPhJ_G0024313	Arl5b	92	37.126	MGP_PWKPhJ_G0025931	Arfrp1	84	40.196
MGP_PWKPhJ_G0024313	Arl5b	96	44.512	MGP_PWKPhJ_G0023703	Arl2	90	44.242
MGP_PWKPhJ_G0024313	Arl5b	97	74.286	MGP_PWKPhJ_G0018127	Arl5c	98	74.286
MGP_PWKPhJ_G0024313	Arl5b	68	31.159	MGP_PWKPhJ_G0022939	Rab12	51	31.159
MGP_PWKPhJ_G0024313	Arl5b	67	30.952	MGP_PWKPhJ_G0025872	Rab22a	61	30.952
MGP_PWKPhJ_G0024313	Arl5b	90	42.593	MGP_PWKPhJ_G0015423	Arl4c	85	42.169