EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0024656 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 136727 bases
Position: chr2:41854883-41991609
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0054138	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_PWKPhJ_P0054138	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_PWKPhJ_P0054138	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_PWKPhJ_P0054138	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_PWKPhJ_P0054138	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_PWKPhJ_P0054140	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_PWKPhJ_P0054140	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_PWKPhJ_P0054140	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_PWKPhJ_P0054140	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_PWKPhJ_P0054140	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_PWKPhJ_P0054134	zf-C2H2	PF00096.26	2.2e-24	1	5
MGP_PWKPhJ_P0054134	zf-C2H2	PF00096.26	2.2e-24	2	5
MGP_PWKPhJ_P0054134	zf-C2H2	PF00096.26	2.2e-24	3	5
MGP_PWKPhJ_P0054134	zf-C2H2	PF00096.26	2.2e-24	4	5
MGP_PWKPhJ_P0054134	zf-C2H2	PF00096.26	2.2e-24	5	5
MGP_PWKPhJ_P0054136	zf-C2H2	PF00096.26	2.2e-24	1	5
MGP_PWKPhJ_P0054136	zf-C2H2	PF00096.26	2.2e-24	2	5
MGP_PWKPhJ_P0054136	zf-C2H2	PF00096.26	2.2e-24	3	5
MGP_PWKPhJ_P0054136	zf-C2H2	PF00096.26	2.2e-24	4	5
MGP_PWKPhJ_P0054136	zf-C2H2	PF00096.26	2.2e-24	5	5
MGP_PWKPhJ_P0054139	zf-C2H2	PF00096.26	2.2e-24	1	5
MGP_PWKPhJ_P0054139	zf-C2H2	PF00096.26	2.2e-24	2	5
MGP_PWKPhJ_P0054139	zf-C2H2	PF00096.26	2.2e-24	3	5
MGP_PWKPhJ_P0054139	zf-C2H2	PF00096.26	2.2e-24	4	5
MGP_PWKPhJ_P0054139	zf-C2H2	PF00096.26	2.2e-24	5	5
MGP_PWKPhJ_P0054137	zf-C2H2	PF00096.26	3e-24	1	5
MGP_PWKPhJ_P0054137	zf-C2H2	PF00096.26	3e-24	2	5
MGP_PWKPhJ_P0054137	zf-C2H2	PF00096.26	3e-24	3	5
MGP_PWKPhJ_P0054137	zf-C2H2	PF00096.26	3e-24	4	5
MGP_PWKPhJ_P0054137	zf-C2H2	PF00096.26	3e-24	5	5
MGP_PWKPhJ_P0054141	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_PWKPhJ_P0054141	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_PWKPhJ_P0054141	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_PWKPhJ_P0054141	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_PWKPhJ_P0054135	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_PWKPhJ_P0054135	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_PWKPhJ_P0054135	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_PWKPhJ_P0054138	zf-met	PF12874.7	1.4e-06	1	1
MGP_PWKPhJ_P0054140	zf-met	PF12874.7	1.7e-06	1	1
MGP_PWKPhJ_P0054134	zf-met	PF12874.7	1.7e-06	1	1
MGP_PWKPhJ_P0054136	zf-met	PF12874.7	1.7e-06	1	1
MGP_PWKPhJ_P0054139	zf-met	PF12874.7	1.7e-06	1	1
MGP_PWKPhJ_P0054137	zf-met	PF12874.7	2.3e-06	1	1
MGP_PWKPhJ_P0054141	zf-met	PF12874.7	5.9e-05	1	2
MGP_PWKPhJ_P0054141	zf-met	PF12874.7	5.9e-05	2	2
MGP_PWKPhJ_P0054135	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0054152	-	577	-	MGP_PWKPhJ_P0054152	63 (aa)	-	-
MGP_PWKPhJ_T0054153	-	462	-	MGP_PWKPhJ_P0054153	83 (aa)	-	-
MGP_PWKPhJ_T0054150	-	2898	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054151	-	550	-	MGP_PWKPhJ_P0054151	91 (aa)	-	-
MGP_PWKPhJ_T0054149	-	2637	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054148	-	443	-	MGP_PWKPhJ_P0054148	113 (aa)	-	-
MGP_PWKPhJ_T0054145	-	453	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054144	-	709	-	MGP_PWKPhJ_P0054144	184 (aa)	-	-
MGP_PWKPhJ_T0054147	-	619	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054146	-	631	-	MGP_PWKPhJ_P0054146	141 (aa)	-	-
MGP_PWKPhJ_T0054141	-	2236	-	MGP_PWKPhJ_P0054141	731 (aa)	-	-
MGP_PWKPhJ_T0054140	-	3913	-	MGP_PWKPhJ_P0054140	1214 (aa)	-	-
MGP_PWKPhJ_T0054143	-	240	-	MGP_PWKPhJ_P0054143	79 (aa)	-	-
MGP_PWKPhJ_T0054142	-	868	-	MGP_PWKPhJ_P0054142	214 (aa)	-	-
MGP_PWKPhJ_T0054134	-	9815	XM_006498042	MGP_PWKPhJ_P0054134	1215 (aa)	XP_006498105	Q9R0G7
MGP_PWKPhJ_T0054135	-	1762	-	MGP_PWKPhJ_P0054135	220 (aa)	-	-
MGP_PWKPhJ_T0054136	-	5660	-	MGP_PWKPhJ_P0054136	1215 (aa)	-	-
MGP_PWKPhJ_T0054137	-	5371	-	MGP_PWKPhJ_P0054137	1259 (aa)	-	-
MGP_PWKPhJ_T0054156	-	2679	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054157	-	2978	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054154	-	2060	-	MGP_PWKPhJ_P0054154	37 (aa)	-	-
MGP_PWKPhJ_T0054155	-	2597	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054158	-	370	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054159	-	644	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054138	-	4065	-	MGP_PWKPhJ_P0054138	1191 (aa)	-	-
MGP_PWKPhJ_T0054139	-	4020	-	MGP_PWKPhJ_P0054139	1215 (aa)	-	-
MGP_PWKPhJ_T0054161	-	432	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054160	-	3792	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0024656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0024656's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0024656	Zeb2	93	60.294	MGP_PWKPhJ_G0023078	Zeb1	100	69.340