EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0024701 (Gene tree)
Gene ID: -
Gene Symbol: Rbms1
Alias: 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|Mssp|Mssp1|YC1
Full Name: RNA binding motif%2C single stranded interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 217432 bases
Position: chr2:57488925-57706356
Accession: 1861774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0054424	RRM_1	PF00076.22	1.4e-32	1	2
MGP_PWKPhJ_P0054424	RRM_1	PF00076.22	1.4e-32	2	2
MGP_PWKPhJ_P0054422	RRM_1	PF00076.22	1.7e-32	1	2
MGP_PWKPhJ_P0054422	RRM_1	PF00076.22	1.7e-32	2	2
MGP_PWKPhJ_P0054423	RRM_1	PF00076.22	1.8e-32	1	2
MGP_PWKPhJ_P0054423	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0054430	-	123	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054428	-	217	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054429	-	202	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054426	-	757	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054427	-	222	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054424	-	1799	-	MGP_PWKPhJ_P0054424	386 (aa)	-	-
MGP_PWKPhJ_T0054425	-	644	-	-	- (aa)	-	-
MGP_PWKPhJ_T0054422	-	4528	XM_006499940	MGP_PWKPhJ_P0054422	403 (aa)	XP_006500003	Q91W59
MGP_PWKPhJ_T0054423	-	2536	-	MGP_PWKPhJ_P0054423	417 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0024701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0024701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0024701	Rbms1	51	37.209	MGP_PWKPhJ_G0027303	Elavl2	60	41.558
MGP_PWKPhJ_G0024701	Rbms1	99	66.494	MGP_PWKPhJ_G0016957	Rbms2	86	71.470
MGP_PWKPhJ_G0024701	Rbms1	51	33.645	MGP_PWKPhJ_G0033183	Elavl3	50	36.207
MGP_PWKPhJ_G0024701	Rbms1	53	32.773	MGP_PWKPhJ_G0027434	Elavl4	79	31.092
MGP_PWKPhJ_G0024701	Rbms1	96	71.538	MGP_PWKPhJ_G0034096	Rbms3	99	80.841