EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0025058 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 80064 bases
Position: chr2:87869806-87949869
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0055507	RRM_1	PF00076.22	4.1e-52	1	3
MGP_PWKPhJ_P0055507	RRM_1	PF00076.22	4.1e-52	2	3
MGP_PWKPhJ_P0055507	RRM_1	PF00076.22	4.1e-52	3	3
MGP_PWKPhJ_P0055501	RRM_1	PF00076.22	4.3e-52	1	3
MGP_PWKPhJ_P0055501	RRM_1	PF00076.22	4.3e-52	2	3
MGP_PWKPhJ_P0055501	RRM_1	PF00076.22	4.3e-52	3	3
MGP_PWKPhJ_P0055506	RRM_1	PF00076.22	5.3e-52	1	3
MGP_PWKPhJ_P0055506	RRM_1	PF00076.22	5.3e-52	2	3
MGP_PWKPhJ_P0055506	RRM_1	PF00076.22	5.3e-52	3	3
MGP_PWKPhJ_P0055504	RRM_1	PF00076.22	6.8e-52	1	3
MGP_PWKPhJ_P0055504	RRM_1	PF00076.22	6.8e-52	2	3
MGP_PWKPhJ_P0055504	RRM_1	PF00076.22	6.8e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0055506	-	7589	-	MGP_PWKPhJ_P0055506	513 (aa)	-	-
MGP_PWKPhJ_T0055507	-	4439	-	MGP_PWKPhJ_P0055507	483 (aa)	-	-
MGP_PWKPhJ_T0055504	-	7018	-	MGP_PWKPhJ_P0055504	543 (aa)	-	-
MGP_PWKPhJ_T0055505	-	271	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055502	-	426	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055503	-	478	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055500	-	350	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055501	-	7861	-	MGP_PWKPhJ_P0055501	487 (aa)	-	-
MGP_PWKPhJ_T0055508	-	492	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0025058	Celf1	57	43.590	MGP_PWKPhJ_G0033183	Elavl3	71	42.391
MGP_PWKPhJ_G0025058	Celf1	69	41.975	MGP_PWKPhJ_G0027303	Elavl2	85	41.975
MGP_PWKPhJ_G0025058	Celf1	98	44.650	MGP_PWKPhJ_G0016671	Celf5	73	59.859
MGP_PWKPhJ_G0025058	Celf1	98	45.135	MGP_PWKPhJ_G0033610	Celf6	91	45.549
MGP_PWKPhJ_G0025058	Celf1	57	37.879	MGP_PWKPhJ_G0026090	Pabpc4l	65	34.211
MGP_PWKPhJ_G0025058	Celf1	100	80.082	MGP_PWKPhJ_G0024279	Celf2	100	88.060
MGP_PWKPhJ_G0025058	Celf1	52	35.526	MGP_PWKPhJ_G0022132	Pabpc6	53	35.526
MGP_PWKPhJ_G0025058	Celf1	61	30.882	MGP_PWKPhJ_G0020798	Pabpc1	70	30.882
MGP_PWKPhJ_G0025058	Celf1	53	43.421	MGP_PWKPhJ_G0034096	Rbms3	68	43.421
MGP_PWKPhJ_G0025058	Celf1	62	40.741	MGP_PWKPhJ_G0027434	Elavl4	78	40.741
MGP_PWKPhJ_G0025058	Celf1	100	45.200	MGP_PWKPhJ_G0023160	Celf4	100	42.430
MGP_PWKPhJ_G0025058	Celf1	97	43.232	MGP_PWKPhJ_G0026435	Celf3	99	44.043