EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0025128 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 34872 bases
Position: chr2:100469257-100504128
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0055940	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_PWKPhJ_P0055941	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_PWKPhJ_P0055942	Caprin-1_C	PF12287.8	3.3e-90	1	1
MGP_PWKPhJ_P0055947	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_PWKPhJ_P0055943	Caprin-1_C	PF12287.8	3.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0055946	-	809	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055947	-	760	-	MGP_PWKPhJ_P0055947	253 (aa)	-	-
MGP_PWKPhJ_T0055944	-	809	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055945	-	937	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055942	-	1923	-	MGP_PWKPhJ_P0055942	213 (aa)	-	-
MGP_PWKPhJ_T0055943	-	856	-	MGP_PWKPhJ_P0055943	93 (aa)	-	-
MGP_PWKPhJ_T0055940	-	6169	XM_006499902	MGP_PWKPhJ_P0055940	707 (aa)	XP_006499965	Q60865
MGP_PWKPhJ_T0055941	-	4068	-	MGP_PWKPhJ_P0055941	707 (aa)	-	-
MGP_PWKPhJ_T0055953	-	391	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055948	-	570	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055949	-	476	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055950	-	879	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055951	-	555	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055952	-	828	-	-	- (aa)	-	-
MGP_PWKPhJ_T0055954	-	627	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0025128	Caprin1	89	44.656	MGP_PWKPhJ_G0030304	Caprin2	91	37.805