EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0025490 (Gene tree)
Gene ID: -
Gene Symbol: Snrpb2
Alias: 2810052G09Rik
Full Name: U2 small nuclear ribonucleoprotein B
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 10717 bases
Position: chr2:140090271-140100987
Accession: 104805
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0057489	RRM_5	PF13893.6	8.5e-07	1	2
MGP_PWKPhJ_P0057489	RRM_5	PF13893.6	8.5e-07	2	2
MGP_PWKPhJ_P0057489	RRM_1	PF00076.22	3e-25	1	2
MGP_PWKPhJ_P0057489	RRM_1	PF00076.22	3e-25	2	2
MGP_PWKPhJ_P0057491	RRM_1	PF00076.22	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0057489	-	2186	-	MGP_PWKPhJ_P0057489	225 (aa)	-	Q9CQI7
MGP_PWKPhJ_T0057492	-	593	-	-	- (aa)	-	-
MGP_PWKPhJ_T0057493	-	1839	-	-	- (aa)	-	-
MGP_PWKPhJ_T0057490	-	684	-	-	- (aa)	-	-
MGP_PWKPhJ_T0057491	-	636	-	MGP_PWKPhJ_P0057491	143 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0025490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0025490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0025490	Snrpb2	99	57.447	MGP_PWKPhJ_G0033885	Gm5145	80	50.973
MGP_PWKPhJ_G0025490	Snrpb2	99	63.121	MGP_PWKPhJ_G0030666	Snrpa	96	53.430