EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0025725 (Gene tree)
Gene ID: -
Gene Symbol: Srsf6
Alias: 1210001E11Rik|AI314910|AW146126|Sfrs6|Srp55
Full Name: serine/arginine-rich splicing factor 6
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 5813 bases
Position: chr2:160177206-160183018
Accession: 1915246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0058512	RRM_1	PF00076.22	8.4e-32	1	2
MGP_PWKPhJ_P0058512	RRM_1	PF00076.22	8.4e-32	2	2
MGP_PWKPhJ_P0058514	RRM_1	PF00076.22	2.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0058514	-	515	-	MGP_PWKPhJ_P0058514	135 (aa)	-	-
MGP_PWKPhJ_T0058512	-	3660	-	MGP_PWKPhJ_P0058512	339 (aa)	-	-
MGP_PWKPhJ_T0058513	-	1666	-	MGP_PWKPhJ_P0058513	135 (aa)	-	-
MGP_PWKPhJ_T0058511	-	2887	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0025725's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0025725's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0025725	Srsf6	53	35.443	MGP_PWKPhJ_G0034409	Rbmx	77	35.443
MGP_PWKPhJ_G0025725	Srsf6	61	31.868	MGP_PWKPhJ_G0016597	Cirbp	84	31.868
MGP_PWKPhJ_G0025725	Srsf6	56	35.526	MGP_PWKPhJ_G0025638	Raly	54	35.526
MGP_PWKPhJ_G0025725	Srsf6	58	40.670	MGP_PWKPhJ_G0017999	Srsf1	82	42.857
MGP_PWKPhJ_G0025725	Srsf6	51	47.297	MGP_PWKPhJ_G0028782	Srsf9	70	38.674