EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0025818 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik|AW549911|C85792|Stau
Full Name: staufen (RNA binding protein) homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 52023 bases
Position: chr2:164312123-164364145
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0058874	dsrm	PF00035.26	6.4e-27	1	2
MGP_PWKPhJ_P0058874	dsrm	PF00035.26	6.4e-27	2	2
MGP_PWKPhJ_P0058871	dsrm	PF00035.26	6.6e-27	1	2
MGP_PWKPhJ_P0058871	dsrm	PF00035.26	6.6e-27	2	2
MGP_PWKPhJ_P0058875	dsrm	PF00035.26	7.2e-27	1	2
MGP_PWKPhJ_P0058875	dsrm	PF00035.26	7.2e-27	2	2
MGP_PWKPhJ_P0058873	dsrm	PF00035.26	1.3e-23	1	2
MGP_PWKPhJ_P0058873	dsrm	PF00035.26	1.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0058875	-	2866	-	MGP_PWKPhJ_P0058875	487 (aa)	-	-
MGP_PWKPhJ_T0058874	-	2846	-	MGP_PWKPhJ_P0058874	485 (aa)	-	-
MGP_PWKPhJ_T0058877	-	1513	-	MGP_PWKPhJ_P0058877	436 (aa)	-	-
MGP_PWKPhJ_T0058876	-	773	-	-	- (aa)	-	-
MGP_PWKPhJ_T0058871	-	3575	XM_006499071	MGP_PWKPhJ_P0058871	489 (aa)	XP_006499134	Q9Z108
MGP_PWKPhJ_T0058881	-	341	-	-	- (aa)	-	-
MGP_PWKPhJ_T0058873	-	2982	-	MGP_PWKPhJ_P0058873	495 (aa)	-	-
MGP_PWKPhJ_T0058872	-	3575	-	-	- (aa)	-	-
MGP_PWKPhJ_T0058880	-	788	-	-	- (aa)	-	-
MGP_PWKPhJ_T0058879	-	826	-	-	- (aa)	-	-
MGP_PWKPhJ_T0058878	-	862	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0025818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0025818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0025818	Stau1	86	47.826	MGP_PWKPhJ_G0014991	Stau2	84	47.816
MGP_PWKPhJ_G0025818	Stau1	52	31.395	MGP_PWKPhJ_G0024803	Prkra	53	31.395