EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0025819 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 20789 bases
Position: chr2:164391665-164412453
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0058882	ResIII	PF04851.15	1.7e-06	1	1
MGP_PWKPhJ_P0058882	DEAD	PF00270.29	7.2e-45	1	1
MGP_PWKPhJ_P0058884	DEAD	PF00270.29	2.4e-18	1	1
MGP_PWKPhJ_P0058885	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0058884	-	2152	-	MGP_PWKPhJ_P0058884	292 (aa)	-	-
MGP_PWKPhJ_T0058885	-	955	-	MGP_PWKPhJ_P0058885	310 (aa)	-	-
MGP_PWKPhJ_T0058886	-	264	-	-	- (aa)	-	-
MGP_PWKPhJ_T0058887	-	645	-	-	- (aa)	-	-
MGP_PWKPhJ_T0058882	-	2714	XM_006499422	MGP_PWKPhJ_P0058882	760 (aa)	XP_006499485	Q921N6
MGP_PWKPhJ_T0058883	-	1889	-	MGP_PWKPhJ_P0058883	588 (aa)	-	-
MGP_PWKPhJ_T0058888	-	724	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0025819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0025819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0025819	Ddx27	56	32.483	MGP_PWKPhJ_G0021078	Ddx17	56	33.880
MGP_PWKPhJ_G0025819	Ddx27	59	33.696	MGP_PWKPhJ_G0032421	Ddx49	97	38.286
MGP_PWKPhJ_G0025819	Ddx27	52	34.129	MGP_PWKPhJ_G0016418	Ddx50	56	34.272
MGP_PWKPhJ_G0025819	Ddx27	54	32.134	MGP_PWKPhJ_G0022604	Ddx39b	99	36.424
MGP_PWKPhJ_G0025819	Ddx27	53	31.019	MGP_PWKPhJ_G0017114	Ddx56	98	33.065
MGP_PWKPhJ_G0025819	Ddx27	53	33.898	MGP_PWKPhJ_G0015548	Ddx18	64	33.898
MGP_PWKPhJ_G0025819	Ddx27	51	35.938	MGP_PWKPhJ_G0019102	Ddx24	55	35.938