EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0025865 (Gene tree)
Gene ID: -
Gene Symbol: Rbm38
Alias: Rnpc1|Seb4|Seb4l
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 12818 bases
Position: chr2:170618128-170630945
Accession: 1889294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0059071	RRM_1	PF00076.22	1.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0059072	-	620	-	MGP_PWKPhJ_P0059072	107 (aa)	-	-
MGP_PWKPhJ_T0059073	-	440	-	MGP_PWKPhJ_P0059073	125 (aa)	-	-
MGP_PWKPhJ_T0059070	-	2280	-	-	- (aa)	-	-
MGP_PWKPhJ_T0059071	-	889	-	MGP_PWKPhJ_P0059071	237 (aa)	-	-
MGP_PWKPhJ_T0059069	-	936	XM_006499923	MGP_PWKPhJ_P0059069	78 (aa)	XP_006499986	Q62176
MGP_PWKPhJ_T0059074	-	1528	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0025865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0025865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0025865	Rbm38	63	91.837	MGP_PWKPhJ_G0019532	Rbm24	100	68.067
MGP_PWKPhJ_G0025865	Rbm38	66	46.809	MGP_PWKPhJ_G0028786	Msi1	61	51.064
MGP_PWKPhJ_G0025865	Rbm38	70	38.095	MGP_PWKPhJ_G0018004	Msi2	73	37.349
MGP_PWKPhJ_G0025865	Rbm38	77	35.484	MGP_PWKPhJ_G0016603	-	86	35.802
MGP_PWKPhJ_G0025865	Rbm38	74	38.043	MGP_PWKPhJ_G0016597	Cirbp	78	40.476