EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0026227 (Gene tree)
Gene ID: -
Gene Symbol: Rbm46
Alias: EG633285|ENSMUSG00000033882|Gm761|LOC329687
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 41285 bases
Position: chr3:79231049-79272333
Accession: 3645057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0060822	DND1_DSRM	PF14709.7	1.9e-27	1	1
MGP_PWKPhJ_P0060823	DND1_DSRM	PF14709.7	2.2e-27	1	1
MGP_PWKPhJ_P0060821	DND1_DSRM	PF14709.7	2.6e-27	1	1
MGP_PWKPhJ_P0060822	RRM_1	PF00076.22	9e-37	1	3
MGP_PWKPhJ_P0060822	RRM_1	PF00076.22	9e-37	2	3
MGP_PWKPhJ_P0060822	RRM_1	PF00076.22	9e-37	3	3
MGP_PWKPhJ_P0060823	RRM_1	PF00076.22	1e-36	1	3
MGP_PWKPhJ_P0060823	RRM_1	PF00076.22	1e-36	2	3
MGP_PWKPhJ_P0060823	RRM_1	PF00076.22	1e-36	3	3
MGP_PWKPhJ_P0060821	RRM_1	PF00076.22	1.5e-36	1	3
MGP_PWKPhJ_P0060821	RRM_1	PF00076.22	1.5e-36	2	3
MGP_PWKPhJ_P0060821	RRM_1	PF00076.22	1.5e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0060821	-	1794	XM_006501849	MGP_PWKPhJ_P0060821	533 (aa)	XP_006501912	P86049
MGP_PWKPhJ_T0060823	-	2163	-	MGP_PWKPhJ_P0060823	485 (aa)	-	-
MGP_PWKPhJ_T0060822	-	2106	-	MGP_PWKPhJ_P0060822	470 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0026227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0026227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0026227	Rbm46	88	70.064	MGP_PWKPhJ_G0023988	A1cf	96	70.064
MGP_PWKPhJ_G0026227	Rbm46	66	72.468	MGP_PWKPhJ_G0028419	Rbm47	94	73.649
MGP_PWKPhJ_G0026227	Rbm46	63	55.000	MGP_PWKPhJ_G0033812	Syncrip	53	54.333
MGP_PWKPhJ_G0026227	Rbm46	60	57.491	MGP_PWKPhJ_G0027814	-	59	56.329