EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0026435 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 13499 bases
Position: chr3:91318981-91332479
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0061706	RRM_1	PF00076.22	9.5e-54	1	3
MGP_PWKPhJ_P0061706	RRM_1	PF00076.22	9.5e-54	2	3
MGP_PWKPhJ_P0061706	RRM_1	PF00076.22	9.5e-54	3	3
MGP_PWKPhJ_P0061705	RRM_1	PF00076.22	1.6e-53	1	3
MGP_PWKPhJ_P0061705	RRM_1	PF00076.22	1.6e-53	2	3
MGP_PWKPhJ_P0061705	RRM_1	PF00076.22	1.6e-53	3	3
MGP_PWKPhJ_P0061707	RRM_1	PF00076.22	2e-53	1	3
MGP_PWKPhJ_P0061707	RRM_1	PF00076.22	2e-53	2	3
MGP_PWKPhJ_P0061707	RRM_1	PF00076.22	2e-53	3	3
MGP_PWKPhJ_P0061712	RRM_1	PF00076.22	7e-16	1	1
MGP_PWKPhJ_P0061713	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0061709	-	669	-	-	- (aa)	-	-
MGP_PWKPhJ_T0061708	-	1193	-	-	- (aa)	-	-
MGP_PWKPhJ_T0061710	-	2431	-	-	- (aa)	-	-
MGP_PWKPhJ_T0061711	-	2923	-	-	- (aa)	-	-
MGP_PWKPhJ_T0061712	-	779	-	MGP_PWKPhJ_P0061712	182 (aa)	-	-
MGP_PWKPhJ_T0061713	-	726	-	MGP_PWKPhJ_P0061713	231 (aa)	-	-
MGP_PWKPhJ_T0061707	-	1488	-	MGP_PWKPhJ_P0061707	495 (aa)	-	-
MGP_PWKPhJ_T0061706	-	2341	-	MGP_PWKPhJ_P0061706	417 (aa)	-	-
MGP_PWKPhJ_T0061705	-	2734	XM_006502323	MGP_PWKPhJ_P0061705	466 (aa)	XP_006502386	Q8CIN6
MGP_PWKPhJ_T0061715	-	892	-	-	- (aa)	-	-
MGP_PWKPhJ_T0061716	-	858	-	-	- (aa)	-	-
MGP_PWKPhJ_T0061714	-	3333	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0026435's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0026435's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0026435	Celf3	79	37.500	MGP_PWKPhJ_G0022132	Pabpc6	57	37.500
MGP_PWKPhJ_G0026435	Celf3	100	66.848	MGP_PWKPhJ_G0016671	Celf5	100	64.894
MGP_PWKPhJ_G0026435	Celf3	90	55.801	MGP_PWKPhJ_G0024279	Celf2	94	83.333
MGP_PWKPhJ_G0026435	Celf3	67	32.857	MGP_PWKPhJ_G0025746	Pabpc1l	57	34.247
MGP_PWKPhJ_G0026435	Celf3	91	39.474	MGP_PWKPhJ_G0034096	Rbms3	76	39.474
MGP_PWKPhJ_G0026435	Celf3	100	69.072	MGP_PWKPhJ_G0023160	Celf4	97	65.833
MGP_PWKPhJ_G0026435	Celf3	62	41.975	MGP_PWKPhJ_G0027303	Elavl2	76	41.975
MGP_PWKPhJ_G0026435	Celf3	99	44.043	MGP_PWKPhJ_G0025058	Celf1	97	43.232
MGP_PWKPhJ_G0026435	Celf3	80	87.368	MGP_PWKPhJ_G0033610	Celf6	75	85.526
MGP_PWKPhJ_G0026435	Celf3	55	35.616	MGP_PWKPhJ_G0034702	Pabpc5	61	36.709
MGP_PWKPhJ_G0026435	Celf3	98	35.632	MGP_PWKPhJ_G0033183	Elavl3	89	34.940
MGP_PWKPhJ_G0026435	Celf3	61	40.741	MGP_PWKPhJ_G0027434	Elavl4	85	40.741
MGP_PWKPhJ_G0026435	Celf3	77	37.805	MGP_PWKPhJ_G0029778	Tia1	93	38.667