EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0026525 (Gene tree)
Gene ID: -
Gene Symbol: Chd1l
Alias: 4432404A22Rik|Alc1|Snf2p
Full Name: chromodomain helicase DNA binding protein 1-like
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 64512 bases
Position: chr3:94523062-94587573
Accession: 1915308
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0062144	ResIII	PF04851.15	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0062144	-	3030	-	MGP_PWKPhJ_P0062144	904 (aa)	-	-
MGP_PWKPhJ_T0062145	-	2691	-	MGP_PWKPhJ_P0062145	896 (aa)	-	-
MGP_PWKPhJ_T0062146	-	500	-	-	- (aa)	-	-
MGP_PWKPhJ_T0062147	-	2954	-	-	- (aa)	-	-
MGP_PWKPhJ_T0062143	-	776	XM_017319700	MGP_PWKPhJ_P0062143	236 (aa)	XP_017175189	Q9CXF7

Gene Model

Click here to download MGP_PWKPhJ_G0026525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0026525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0026525	Chd1l	54	39.054	MGP_PWKPhJ_G0024048	Hells	69	39.054
MGP_PWKPhJ_G0026525	Chd1l	50	30.000	MGP_PWKPhJ_G0026928	Rad54b	56	30.000
MGP_PWKPhJ_G0026525	Chd1l	51	35.135	MGP_PWKPhJ_G0029634	Smarcad1	52	33.272
MGP_PWKPhJ_G0026525	Chd1l	50	30.382	MGP_PWKPhJ_G0027474	Rad54l	66	30.584
MGP_PWKPhJ_G0026525	Chd1l	50	32.532	MGP_PWKPhJ_G0019689	Ercc6l2	78	32.532
MGP_PWKPhJ_G0026525	Chd1l	63	43.101	MGP_PWKPhJ_G0034347	Smarca1	75	42.445