EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0026865 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 26828 bases
Position: chr3:149395291-149422118
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0063810	KH_1	PF00013.29	7.2e-70	1	4
MGP_PWKPhJ_P0063810	KH_1	PF00013.29	7.2e-70	2	4
MGP_PWKPhJ_P0063810	KH_1	PF00013.29	7.2e-70	3	4
MGP_PWKPhJ_P0063810	KH_1	PF00013.29	7.2e-70	4	4
MGP_PWKPhJ_P0063807	KH_1	PF00013.29	2.2e-69	1	4
MGP_PWKPhJ_P0063807	KH_1	PF00013.29	2.2e-69	2	4
MGP_PWKPhJ_P0063807	KH_1	PF00013.29	2.2e-69	3	4
MGP_PWKPhJ_P0063807	KH_1	PF00013.29	2.2e-69	4	4
MGP_PWKPhJ_P0063813	KH_1	PF00013.29	2.2e-69	1	4
MGP_PWKPhJ_P0063813	KH_1	PF00013.29	2.2e-69	2	4
MGP_PWKPhJ_P0063813	KH_1	PF00013.29	2.2e-69	3	4
MGP_PWKPhJ_P0063813	KH_1	PF00013.29	2.2e-69	4	4
MGP_PWKPhJ_P0063811	KH_1	PF00013.29	2.4e-69	1	4
MGP_PWKPhJ_P0063811	KH_1	PF00013.29	2.4e-69	2	4
MGP_PWKPhJ_P0063811	KH_1	PF00013.29	2.4e-69	3	4
MGP_PWKPhJ_P0063811	KH_1	PF00013.29	2.4e-69	4	4
MGP_PWKPhJ_P0063809	KH_1	PF00013.29	2.5e-69	1	4
MGP_PWKPhJ_P0063809	KH_1	PF00013.29	2.5e-69	2	4
MGP_PWKPhJ_P0063809	KH_1	PF00013.29	2.5e-69	3	4
MGP_PWKPhJ_P0063809	KH_1	PF00013.29	2.5e-69	4	4
MGP_PWKPhJ_P0063808	KH_1	PF00013.29	7.7e-38	1	2
MGP_PWKPhJ_P0063808	KH_1	PF00013.29	7.7e-38	2	2
MGP_PWKPhJ_P0063817	KH_1	PF00013.29	1.1e-16	1	1
MGP_PWKPhJ_P0063810	KH_2	PF07650.17	1.3e-22	1	2
MGP_PWKPhJ_P0063810	KH_2	PF07650.17	1.3e-22	2	2
MGP_PWKPhJ_P0063813	KH_2	PF07650.17	3.4e-22	1	2
MGP_PWKPhJ_P0063813	KH_2	PF07650.17	3.4e-22	2	2
MGP_PWKPhJ_P0063811	KH_2	PF07650.17	3.6e-22	1	2
MGP_PWKPhJ_P0063811	KH_2	PF07650.17	3.6e-22	2	2
MGP_PWKPhJ_P0063809	KH_2	PF07650.17	3.7e-22	1	2
MGP_PWKPhJ_P0063809	KH_2	PF07650.17	3.7e-22	2	2
MGP_PWKPhJ_P0063807	KH_2	PF07650.17	3.7e-22	1	2
MGP_PWKPhJ_P0063807	KH_2	PF07650.17	3.7e-22	2	2
MGP_PWKPhJ_P0063808	KH_2	PF07650.17	3.9e-10	1	1
MGP_PWKPhJ_P0063817	KH_2	PF07650.17	5.3e-06	1	1
MGP_PWKPhJ_P0063821	DUF1897	PF09005.10	1.7e-12	1	2
MGP_PWKPhJ_P0063821	DUF1897	PF09005.10	1.7e-12	2	2
MGP_PWKPhJ_P0063819	DUF1897	PF09005.10	2.1e-12	1	2
MGP_PWKPhJ_P0063819	DUF1897	PF09005.10	2.1e-12	2	2
MGP_PWKPhJ_P0063807	DUF1897	PF09005.10	2.5e-11	1	2
MGP_PWKPhJ_P0063807	DUF1897	PF09005.10	2.5e-11	2	2
MGP_PWKPhJ_P0063813	DUF1897	PF09005.10	2.5e-11	1	2
MGP_PWKPhJ_P0063813	DUF1897	PF09005.10	2.5e-11	2	2
MGP_PWKPhJ_P0063811	DUF1897	PF09005.10	2.6e-11	1	2
MGP_PWKPhJ_P0063811	DUF1897	PF09005.10	2.6e-11	2	2
MGP_PWKPhJ_P0063809	DUF1897	PF09005.10	2.7e-11	1	2
MGP_PWKPhJ_P0063809	DUF1897	PF09005.10	2.7e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0063811	-	2526	-	MGP_PWKPhJ_P0063811	651 (aa)	-	-
MGP_PWKPhJ_T0063807	-	6523	XM_006501660	MGP_PWKPhJ_P0063807	642 (aa)	XP_006501723	Q91WJ8
MGP_PWKPhJ_T0063813	-	2374	-	MGP_PWKPhJ_P0063813	643 (aa)	-	-
MGP_PWKPhJ_T0063812	-	2093	-	MGP_PWKPhJ_P0063812	69 (aa)	-	-
MGP_PWKPhJ_T0063815	-	4525	-	MGP_PWKPhJ_P0063815	642 (aa)	-	-
MGP_PWKPhJ_T0063814	-	4840	-	MGP_PWKPhJ_P0063814	700 (aa)	-	-
MGP_PWKPhJ_T0063817	-	585	-	MGP_PWKPhJ_P0063817	149 (aa)	-	-
MGP_PWKPhJ_T0063810	-	3163	-	MGP_PWKPhJ_P0063810	523 (aa)	-	-
MGP_PWKPhJ_T0063819	-	796	-	MGP_PWKPhJ_P0063819	141 (aa)	-	-
MGP_PWKPhJ_T0063818	-	512	-	-	- (aa)	-	-
MGP_PWKPhJ_T0063816	-	432	-	-	- (aa)	-	-
MGP_PWKPhJ_T0063808	-	1040	-	MGP_PWKPhJ_P0063808	306 (aa)	-	-
MGP_PWKPhJ_T0063809	-	2552	-	MGP_PWKPhJ_P0063809	654 (aa)	-	-
MGP_PWKPhJ_T0063824	-	3991	-	-	- (aa)	-	-
MGP_PWKPhJ_T0063825	-	665	-	-	- (aa)	-	-
MGP_PWKPhJ_T0063820	-	800	-	MGP_PWKPhJ_P0063820	173 (aa)	-	-
MGP_PWKPhJ_T0063821	-	809	-	MGP_PWKPhJ_P0063821	156 (aa)	-	-
MGP_PWKPhJ_T0063822	-	5099	-	-	- (aa)	-	-
MGP_PWKPhJ_T0063823	-	424	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0026865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0026865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0026865	Fubp1	94	59.208	MGP_PWKPhJ_G0024530	Fubp3	96	64.324
MGP_PWKPhJ_G0026865	Fubp1	72	34.524	MGP_PWKPhJ_G0033933	Pcbp4	76	33.684
MGP_PWKPhJ_G0026865	Fubp1	53	36.923	MGP_PWKPhJ_G0019652	Hnrnpk	55	36.923
MGP_PWKPhJ_G0026865	Fubp1	50	36.364	MGP_PWKPhJ_G0018780	Nova1	57	36.364
MGP_PWKPhJ_G0026865	Fubp1	61	36.765	MGP_PWKPhJ_G0030518	-	54	36.765
MGP_PWKPhJ_G0026865	Fubp1	61	36.765	MGP_PWKPhJ_G0030519	-	54	36.765
MGP_PWKPhJ_G0026865	Fubp1	72	33.019	MGP_PWKPhJ_G0016505	Pcbp3	66	31.250
MGP_PWKPhJ_G0026865	Fubp1	96	64.410	MGP_PWKPhJ_G0022900	Khsrp	58	81.250