EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0026915 (Gene tree)
Gene ID: -
Gene Symbol: Chd7
Alias: A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 181864 bases
Position: chr4:5134183-5316046
Accession: 2444748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0064122	ResIII	PF04851.15	4.6e-06	1	1
MGP_PWKPhJ_P0064123	ResIII	PF04851.15	4.6e-06	1	1
MGP_PWKPhJ_P0064122	BRK	PF07533.16	4.8e-37	1	2
MGP_PWKPhJ_P0064122	BRK	PF07533.16	4.8e-37	2	2
MGP_PWKPhJ_P0064123	BRK	PF07533.16	4.8e-37	1	2
MGP_PWKPhJ_P0064123	BRK	PF07533.16	4.8e-37	2	2
MGP_PWKPhJ_P0064125	BRK	PF07533.16	1.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0064120	-	2381	-	MGP_PWKPhJ_P0064120	631 (aa)	-	-
MGP_PWKPhJ_T0064121	-	10570	-	MGP_PWKPhJ_P0064121	2985 (aa)	-	-
MGP_PWKPhJ_T0064122	-	9444	-	MGP_PWKPhJ_P0064122	2986 (aa)	-	-
MGP_PWKPhJ_T0064123	-	10408	-	MGP_PWKPhJ_P0064123	2986 (aa)	-	-
MGP_PWKPhJ_T0064124	-	448	-	MGP_PWKPhJ_P0064124	19 (aa)	-	-
MGP_PWKPhJ_T0064125	-	3462	-	MGP_PWKPhJ_P0064125	941 (aa)	-	-
MGP_PWKPhJ_T0064126	-	741	-	-	- (aa)	-	-
MGP_PWKPhJ_T0064119	-	4902	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0026915	Chd7	94	54.243	MGP_PWKPhJ_G0032646	Chd9	82	70.874
MGP_PWKPhJ_G0026915	Chd7	72	64.837	MGP_PWKPhJ_G0025723	Chd6	76	66.875