EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_PWKPhJ_G0027200 (Gene tree)
Gene ID
-
Gene Symbol
Ptbp3
Alias
5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1
Full Name
polypyrimidine tract binding protein 3
Gene Type
protein_coding
Species
Mus_musculus_pwkphj
Status
putative
Strand
Minus strand
Length
80552 bases
Position
chr4:56067231-56147782
Accession
1923334
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PWKPhJ_P0065428RRM_5PF13893.61.2e-6113
MGP_PWKPhJ_P0065428RRM_5PF13893.61.2e-6123
MGP_PWKPhJ_P0065428RRM_5PF13893.61.2e-6133
MGP_PWKPhJ_P0065427RRM_5PF13893.61.2e-6113
MGP_PWKPhJ_P0065427RRM_5PF13893.61.2e-6123
MGP_PWKPhJ_P0065427RRM_5PF13893.61.2e-6133
MGP_PWKPhJ_P0065430RRM_5PF13893.61.3e-4711
MGP_PWKPhJ_P0065433RRM_5PF13893.67.3e-0611
MGP_PWKPhJ_P0065428RRM_1PF00076.222.1e-3113
MGP_PWKPhJ_P0065428RRM_1PF00076.222.1e-3123
MGP_PWKPhJ_P0065428RRM_1PF00076.222.1e-3133
MGP_PWKPhJ_P0065427RRM_1PF00076.222.2e-3113
MGP_PWKPhJ_P0065427RRM_1PF00076.222.2e-3123
MGP_PWKPhJ_P0065427RRM_1PF00076.222.2e-3133
MGP_PWKPhJ_P0065433RRM_1PF00076.222.8e-1111
MGP_PWKPhJ_P0065430RRM_1PF00076.223.9e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PWKPhJ_T0065431-1286-MGP_PWKPhJ_P006543145 (aa)--
MGP_PWKPhJ_T0065427-6679XM_006537851MGP_PWKPhJ_P0065427554 (aa)XP_006537914Q8BHD7
MGP_PWKPhJ_T0065433-550-MGP_PWKPhJ_P0065433146 (aa)--
MGP_PWKPhJ_T0065432-558-MGP_PWKPhJ_P006543241 (aa)--
MGP_PWKPhJ_T0065435-606-MGP_PWKPhJ_P0065435104 (aa)--
MGP_PWKPhJ_T0065434-446--- (aa)--
MGP_PWKPhJ_T0065430-566-MGP_PWKPhJ_P0065430188 (aa)--
MGP_PWKPhJ_T0065428-3414-MGP_PWKPhJ_P0065428551 (aa)--
MGP_PWKPhJ_T0065429-669--- (aa)--
Gene Model
Click here to download MGP_PWKPhJ_G0027200's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0027200's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PWKPhJ_G0027200Ptbp39178.195MGP_PWKPhJ_G0026709Ptbp29969.835
MGP_PWKPhJ_G0027200Ptbp38335.537MGP_PWKPhJ_G0030726Hnrnpl5536.207

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