EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0027303 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 149674 bases
Position: chr4:86041441-86191114
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0065847	RRM_5	PF13893.6	1.3e-12	1	2
MGP_PWKPhJ_P0065847	RRM_5	PF13893.6	1.3e-12	2	2
MGP_PWKPhJ_P0065849	RRM_5	PF13893.6	1.5e-12	1	2
MGP_PWKPhJ_P0065849	RRM_5	PF13893.6	1.5e-12	2	2
MGP_PWKPhJ_P0065848	RRM_5	PF13893.6	1.8e-12	1	2
MGP_PWKPhJ_P0065848	RRM_5	PF13893.6	1.8e-12	2	2
MGP_PWKPhJ_P0065850	RRM_5	PF13893.6	1.9e-12	1	2
MGP_PWKPhJ_P0065850	RRM_5	PF13893.6	1.9e-12	2	2
MGP_PWKPhJ_P0065853	RRM_5	PF13893.6	2.2e-12	1	2
MGP_PWKPhJ_P0065853	RRM_5	PF13893.6	2.2e-12	2	2
MGP_PWKPhJ_P0065852	RRM_5	PF13893.6	2.2e-12	1	2
MGP_PWKPhJ_P0065852	RRM_5	PF13893.6	2.2e-12	2	2
MGP_PWKPhJ_P0065847	RRM_1	PF00076.22	1.2e-66	1	3
MGP_PWKPhJ_P0065847	RRM_1	PF00076.22	1.2e-66	2	3
MGP_PWKPhJ_P0065847	RRM_1	PF00076.22	1.2e-66	3	3
MGP_PWKPhJ_P0065849	RRM_1	PF00076.22	1.4e-66	1	3
MGP_PWKPhJ_P0065849	RRM_1	PF00076.22	1.4e-66	2	3
MGP_PWKPhJ_P0065849	RRM_1	PF00076.22	1.4e-66	3	3
MGP_PWKPhJ_P0065848	RRM_1	PF00076.22	1.6e-66	1	3
MGP_PWKPhJ_P0065848	RRM_1	PF00076.22	1.6e-66	2	3
MGP_PWKPhJ_P0065848	RRM_1	PF00076.22	1.6e-66	3	3
MGP_PWKPhJ_P0065850	RRM_1	PF00076.22	1.7e-66	1	3
MGP_PWKPhJ_P0065850	RRM_1	PF00076.22	1.7e-66	2	3
MGP_PWKPhJ_P0065850	RRM_1	PF00076.22	1.7e-66	3	3
MGP_PWKPhJ_P0065852	RRM_1	PF00076.22	2e-66	1	3
MGP_PWKPhJ_P0065852	RRM_1	PF00076.22	2e-66	2	3
MGP_PWKPhJ_P0065852	RRM_1	PF00076.22	2e-66	3	3
MGP_PWKPhJ_P0065853	RRM_1	PF00076.22	2.1e-66	1	3
MGP_PWKPhJ_P0065853	RRM_1	PF00076.22	2.1e-66	2	3
MGP_PWKPhJ_P0065853	RRM_1	PF00076.22	2.1e-66	3	3
MGP_PWKPhJ_P0065855	RRM_1	PF00076.22	7.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0065854	-	3194	-	-	- (aa)	-	-
MGP_PWKPhJ_T0065848	-	3837	-	MGP_PWKPhJ_P0065848	373 (aa)	-	-
MGP_PWKPhJ_T0065849	-	3727	-	MGP_PWKPhJ_P0065849	360 (aa)	-	-
MGP_PWKPhJ_T0065858	-	415	-	-	- (aa)	-	-
MGP_PWKPhJ_T0065857	-	450	-	-	- (aa)	-	-
MGP_PWKPhJ_T0065856	-	408	-	MGP_PWKPhJ_P0065856	83 (aa)	-	-
MGP_PWKPhJ_T0065855	-	425	-	MGP_PWKPhJ_P0065855	125 (aa)	-	-
MGP_PWKPhJ_T0065847	-	3668	XM_006502778	MGP_PWKPhJ_P0065847	347 (aa)	XP_006502841	Q60899
MGP_PWKPhJ_T0065853	-	1282	-	MGP_PWKPhJ_P0065853	389 (aa)	-	-
MGP_PWKPhJ_T0065852	-	1167	-	MGP_PWKPhJ_P0065852	388 (aa)	-	-
MGP_PWKPhJ_T0065851	-	930	-	-	- (aa)	-	-
MGP_PWKPhJ_T0065850	-	3794	-	MGP_PWKPhJ_P0065850	376 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0027303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0027303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0027303	Elavl2	96	34.615	MGP_PWKPhJ_G0029778	Tia1	89	34.615
MGP_PWKPhJ_G0027303	Elavl2	85	41.975	MGP_PWKPhJ_G0025058	Celf1	69	41.975
MGP_PWKPhJ_G0027303	Elavl2	88	39.506	MGP_PWKPhJ_G0023160	Celf4	91	37.037
MGP_PWKPhJ_G0027303	Elavl2	97	30.857	MGP_PWKPhJ_G0016671	Celf5	97	30.857
MGP_PWKPhJ_G0027303	Elavl2	83	39.506	MGP_PWKPhJ_G0024279	Celf2	87	33.333
MGP_PWKPhJ_G0027303	Elavl2	100	89.751	MGP_PWKPhJ_G0027434	Elavl4	99	89.315
MGP_PWKPhJ_G0027303	Elavl2	59	33.784	MGP_PWKPhJ_G0026508	Rbm8a	81	33.784
MGP_PWKPhJ_G0027303	Elavl2	100	79.292	MGP_PWKPhJ_G0033183	Elavl3	100	78.400
MGP_PWKPhJ_G0027303	Elavl2	67	35.714	MGP_PWKPhJ_G0028914	Snrnp35	60	37.500
MGP_PWKPhJ_G0027303	Elavl2	73	34.831	MGP_PWKPhJ_G0034409	Rbmx	86	34.831
MGP_PWKPhJ_G0027303	Elavl2	60	41.558	MGP_PWKPhJ_G0024701	Rbms1	51	37.209
MGP_PWKPhJ_G0027303	Elavl2	76	41.975	MGP_PWKPhJ_G0026435	Celf3	62	41.975
MGP_PWKPhJ_G0027303	Elavl2	69	37.209	MGP_PWKPhJ_G0034096	Rbms3	83	37.222
MGP_PWKPhJ_G0027303	Elavl2	78	40.741	MGP_PWKPhJ_G0033610	Celf6	89	37.037
MGP_PWKPhJ_G0027303	Elavl2	63	32.911	MGP_PWKPhJ_G0034224	Rbm3	82	38.710
MGP_PWKPhJ_G0027303	Elavl2	64	37.500	MGP_PWKPhJ_G0016597	Cirbp	76	37.500
MGP_PWKPhJ_G0027303	Elavl2	89	36.145	MGP_PWKPhJ_G0023321	Pabpc2	59	36.145
MGP_PWKPhJ_G0027303	Elavl2	92	34.940	MGP_PWKPhJ_G0025746	Pabpc1l	64	34.940
MGP_PWKPhJ_G0027303	Elavl2	89	34.940	MGP_PWKPhJ_G0026090	Pabpc4l	96	34.940
MGP_PWKPhJ_G0027303	Elavl2	66	30.952	MGP_PWKPhJ_G0027718	Trnau1ap	98	30.952
MGP_PWKPhJ_G0027303	Elavl2	64	31.250	MGP_PWKPhJ_G0018004	Msi2	70	31.250
MGP_PWKPhJ_G0027303	Elavl2	90	37.349	MGP_PWKPhJ_G0022132	Pabpc6	60	37.349
MGP_PWKPhJ_G0027303	Elavl2	89	37.037	MGP_PWKPhJ_G0034702	Pabpc5	94	37.037
MGP_PWKPhJ_G0027303	Elavl2	89	37.349	MGP_PWKPhJ_G0020798	Pabpc1	79	37.349