EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0027434 (Gene tree)
Gene ID: -
Gene Symbol: Elavl4
Alias: Elav|Hud|PNEM
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 4 (Hu antigen D)
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 146485 bases
Position: chr4:104912930-105059414
Accession: 107427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0066519	RRM_5	PF13893.6	2.9e-13	1	2
MGP_PWKPhJ_P0066519	RRM_5	PF13893.6	2.9e-13	2	2
MGP_PWKPhJ_P0066517	RRM_5	PF13893.6	3.2e-13	1	2
MGP_PWKPhJ_P0066517	RRM_5	PF13893.6	3.2e-13	2	2
MGP_PWKPhJ_P0066521	RRM_5	PF13893.6	3.3e-13	1	2
MGP_PWKPhJ_P0066521	RRM_5	PF13893.6	3.3e-13	2	2
MGP_PWKPhJ_P0066523	RRM_5	PF13893.6	3.5e-13	1	2
MGP_PWKPhJ_P0066523	RRM_5	PF13893.6	3.5e-13	2	2
MGP_PWKPhJ_P0066518	RRM_5	PF13893.6	3.7e-13	1	2
MGP_PWKPhJ_P0066518	RRM_5	PF13893.6	3.7e-13	2	2
MGP_PWKPhJ_P0066520	RRM_5	PF13893.6	4e-13	1	2
MGP_PWKPhJ_P0066520	RRM_5	PF13893.6	4e-13	2	2
MGP_PWKPhJ_P0066522	RRM_5	PF13893.6	4e-13	1	2
MGP_PWKPhJ_P0066522	RRM_5	PF13893.6	4e-13	2	2
MGP_PWKPhJ_P0066519	RRM_1	PF00076.22	2.1e-65	1	3
MGP_PWKPhJ_P0066519	RRM_1	PF00076.22	2.1e-65	2	3
MGP_PWKPhJ_P0066519	RRM_1	PF00076.22	2.1e-65	3	3
MGP_PWKPhJ_P0066521	RRM_1	PF00076.22	2.4e-65	1	3
MGP_PWKPhJ_P0066521	RRM_1	PF00076.22	2.4e-65	2	3
MGP_PWKPhJ_P0066521	RRM_1	PF00076.22	2.4e-65	3	3
MGP_PWKPhJ_P0066517	RRM_1	PF00076.22	2.4e-65	1	3
MGP_PWKPhJ_P0066517	RRM_1	PF00076.22	2.4e-65	2	3
MGP_PWKPhJ_P0066517	RRM_1	PF00076.22	2.4e-65	3	3
MGP_PWKPhJ_P0066523	RRM_1	PF00076.22	2.6e-65	1	3
MGP_PWKPhJ_P0066523	RRM_1	PF00076.22	2.6e-65	2	3
MGP_PWKPhJ_P0066523	RRM_1	PF00076.22	2.6e-65	3	3
MGP_PWKPhJ_P0066518	RRM_1	PF00076.22	2.9e-65	1	3
MGP_PWKPhJ_P0066518	RRM_1	PF00076.22	2.9e-65	2	3
MGP_PWKPhJ_P0066518	RRM_1	PF00076.22	2.9e-65	3	3
MGP_PWKPhJ_P0066520	RRM_1	PF00076.22	3e-65	1	3
MGP_PWKPhJ_P0066520	RRM_1	PF00076.22	3e-65	2	3
MGP_PWKPhJ_P0066520	RRM_1	PF00076.22	3e-65	3	3
MGP_PWKPhJ_P0066522	RRM_1	PF00076.22	3.1e-65	1	3
MGP_PWKPhJ_P0066522	RRM_1	PF00076.22	3.1e-65	2	3
MGP_PWKPhJ_P0066522	RRM_1	PF00076.22	3.1e-65	3	3
MGP_PWKPhJ_P0066526	RRM_1	PF00076.22	1.3e-20	1	1
MGP_PWKPhJ_P0066528	RRM_1	PF00076.22	9.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0066522	-	4469	-	MGP_PWKPhJ_P0066522	385 (aa)	-	-
MGP_PWKPhJ_T0066523	-	4427	-	MGP_PWKPhJ_P0066523	371 (aa)	-	-
MGP_PWKPhJ_T0066520	-	4119	-	MGP_PWKPhJ_P0066520	383 (aa)	-	-
MGP_PWKPhJ_T0066521	-	4095	-	MGP_PWKPhJ_P0066521	366 (aa)	-	-
MGP_PWKPhJ_T0066526	-	644	-	MGP_PWKPhJ_P0066526	137 (aa)	-	-
MGP_PWKPhJ_T0066527	-	464	-	-	- (aa)	-	-
MGP_PWKPhJ_T0066524	-	1015	-	MGP_PWKPhJ_P0066524	270 (aa)	-	-
MGP_PWKPhJ_T0066525	-	869	-	-	- (aa)	-	-
MGP_PWKPhJ_T0066528	-	488	-	MGP_PWKPhJ_P0066528	92 (aa)	-	-
MGP_PWKPhJ_T0066519	-	4081	-	MGP_PWKPhJ_P0066519	356 (aa)	-	-
MGP_PWKPhJ_T0066518	-	4702	-	MGP_PWKPhJ_P0066518	380 (aa)	-	-
MGP_PWKPhJ_T0066517	-	4675	XM_006502793	MGP_PWKPhJ_P0066517	366 (aa)	XP_006502856	Q61701

Gene Model

Click here to download MGP_PWKPhJ_G0027434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0027434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0027434	Elavl4	99	89.315	MGP_PWKPhJ_G0027303	Elavl2	100	89.751
MGP_PWKPhJ_G0027434	Elavl4	78	40.741	MGP_PWKPhJ_G0025058	Celf1	62	40.741
MGP_PWKPhJ_G0027434	Elavl4	70	38.889	MGP_PWKPhJ_G0016597	Cirbp	84	38.889
MGP_PWKPhJ_G0027434	Elavl4	92	38.272	MGP_PWKPhJ_G0023160	Celf4	91	35.802
MGP_PWKPhJ_G0027434	Elavl4	94	35.897	MGP_PWKPhJ_G0029778	Tia1	98	32.895
MGP_PWKPhJ_G0027434	Elavl4	58	31.646	MGP_PWKPhJ_G0034224	Rbm3	82	38.710
MGP_PWKPhJ_G0027434	Elavl4	70	35.484	MGP_PWKPhJ_G0026090	Pabpc4l	96	30.065
MGP_PWKPhJ_G0027434	Elavl4	88	34.940	MGP_PWKPhJ_G0023321	Pabpc2	59	34.940
MGP_PWKPhJ_G0027434	Elavl4	88	36.145	MGP_PWKPhJ_G0020798	Pabpc1	79	36.145
MGP_PWKPhJ_G0027434	Elavl4	88	32.468	MGP_PWKPhJ_G0022132	Pabpc6	60	32.468
MGP_PWKPhJ_G0027434	Elavl4	80	33.333	MGP_PWKPhJ_G0034096	Rbms3	83	37.097
MGP_PWKPhJ_G0027434	Elavl4	85	40.741	MGP_PWKPhJ_G0026435	Celf3	61	40.741
MGP_PWKPhJ_G0027434	Elavl4	67	30.208	MGP_PWKPhJ_G0018004	Msi2	84	30.208
MGP_PWKPhJ_G0027434	Elavl4	85	40.741	MGP_PWKPhJ_G0033610	Celf6	95	35.802
MGP_PWKPhJ_G0027434	Elavl4	74	33.708	MGP_PWKPhJ_G0034409	Rbmx	86	33.708
MGP_PWKPhJ_G0027434	Elavl4	89	33.735	MGP_PWKPhJ_G0025746	Pabpc1l	62	33.735
MGP_PWKPhJ_G0027434	Elavl4	66	42.373	MGP_PWKPhJ_G0016603	-	64	30.275
MGP_PWKPhJ_G0027434	Elavl4	61	32.530	MGP_PWKPhJ_G0028914	Snrnp35	59	33.803
MGP_PWKPhJ_G0027434	Elavl4	99	79.893	MGP_PWKPhJ_G0033183	Elavl3	99	80.323
MGP_PWKPhJ_G0027434	Elavl4	79	31.092	MGP_PWKPhJ_G0024701	Rbms1	53	32.773
MGP_PWKPhJ_G0027434	Elavl4	54	33.784	MGP_PWKPhJ_G0026508	Rbm8a	86	31.683
MGP_PWKPhJ_G0027434	Elavl4	74	37.500	MGP_PWKPhJ_G0016671	Celf5	61	38.095
MGP_PWKPhJ_G0027434	Elavl4	81	38.272	MGP_PWKPhJ_G0024279	Celf2	61	38.272
MGP_PWKPhJ_G0027434	Elavl4	72	35.821	MGP_PWKPhJ_G0029532	Tra2a	59	37.097