EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0027703 (Gene tree)
Gene ID: -
Gene Symbol: Pum1
Alias: AA517475|Kiaa0099|Pumm|mKIAA0099
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 121869 bases
Position: chr4:124261074-124382942
Accession: 1931749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	1	8
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	2	8
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	3	8
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	4	8
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	5	8
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	6	8
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	7	8
MGP_PWKPhJ_P0067754	PUF	PF00806.19	3.2e-70	8	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	1	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	2	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	3	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	4	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	5	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	6	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	7	8
MGP_PWKPhJ_P0067758	PUF	PF00806.19	2.5e-69	8	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	1	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	2	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	3	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	4	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	5	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	6	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	7	8
MGP_PWKPhJ_P0067755	PUF	PF00806.19	2.8e-69	8	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	1	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	2	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	3	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	4	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	5	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	6	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	7	8
MGP_PWKPhJ_P0067759	PUF	PF00806.19	6e-69	8	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	1	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	2	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	3	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	4	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	5	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	6	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	7	8
MGP_PWKPhJ_P0067753	PUF	PF00806.19	6e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0067758	-	4017	-	MGP_PWKPhJ_P0067758	1186 (aa)	-	-
MGP_PWKPhJ_T0067759	-	3991	-	MGP_PWKPhJ_P0067759	1188 (aa)	-	-
MGP_PWKPhJ_T0067756	-	1276	-	-	- (aa)	-	-
MGP_PWKPhJ_T0067757	-	693	-	MGP_PWKPhJ_P0067757	218 (aa)	-	-
MGP_PWKPhJ_T0067754	-	4541	-	MGP_PWKPhJ_P0067754	944 (aa)	-	-
MGP_PWKPhJ_T0067755	-	4985	-	MGP_PWKPhJ_P0067755	1092 (aa)	-	-
MGP_PWKPhJ_T0067753	-	5316	XM_006539291	MGP_PWKPhJ_P0067753	1189 (aa)	XP_006539354	Q80U78

Gene Model

Click here to download MGP_PWKPhJ_G0027703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0027703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0027703	Pum1	86	87.294	MGP_PWKPhJ_G0018656	Pum2	100	88.835