EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0027814 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 51170 bases
Position: chr4:130137258-130188427
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0068290	RRM_1	PF00076.22	3.8e-41	1	3
MGP_PWKPhJ_P0068290	RRM_1	PF00076.22	3.8e-41	2	3
MGP_PWKPhJ_P0068290	RRM_1	PF00076.22	3.8e-41	3	3
MGP_PWKPhJ_P0068293	RRM_1	PF00076.22	3.8e-41	1	3
MGP_PWKPhJ_P0068293	RRM_1	PF00076.22	3.8e-41	2	3
MGP_PWKPhJ_P0068293	RRM_1	PF00076.22	3.8e-41	3	3
MGP_PWKPhJ_P0068291	RRM_1	PF00076.22	5.7e-41	1	3
MGP_PWKPhJ_P0068291	RRM_1	PF00076.22	5.7e-41	2	3
MGP_PWKPhJ_P0068291	RRM_1	PF00076.22	5.7e-41	3	3
MGP_PWKPhJ_P0068292	RRM_1	PF00076.22	5.7e-41	1	3
MGP_PWKPhJ_P0068292	RRM_1	PF00076.22	5.7e-41	2	3
MGP_PWKPhJ_P0068292	RRM_1	PF00076.22	5.7e-41	3	3
MGP_PWKPhJ_P0068296	RRM_1	PF00076.22	5.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0068292	-	2334	-	MGP_PWKPhJ_P0068292	632 (aa)	-	-
MGP_PWKPhJ_T0068293	-	2298	-	MGP_PWKPhJ_P0068293	531 (aa)	-	-
MGP_PWKPhJ_T0068290	-	2194	-	MGP_PWKPhJ_P0068290	531 (aa)	-	-
MGP_PWKPhJ_T0068291	-	21120	-	MGP_PWKPhJ_P0068291	632 (aa)	-	-
MGP_PWKPhJ_T0068296	-	980	-	MGP_PWKPhJ_P0068296	270 (aa)	-	-
MGP_PWKPhJ_T0068297	-	292	-	MGP_PWKPhJ_P0068297	73 (aa)	-	-
MGP_PWKPhJ_T0068294	-	859	-	MGP_PWKPhJ_P0068294	103 (aa)	-	-
MGP_PWKPhJ_T0068295	-	541	-	MGP_PWKPhJ_P0068295	72 (aa)	-	-
MGP_PWKPhJ_T0068298	-	484	-	-	- (aa)	-	-
MGP_PWKPhJ_T0068299	-	3599	-	-	- (aa)	-	-
MGP_PWKPhJ_T0068300	-	1916	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0027814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0027814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0027814	-	99	81.716	MGP_PWKPhJ_G0033812	Syncrip	70	84.304
MGP_PWKPhJ_G0027814	-	57	37.908	MGP_PWKPhJ_G0023242	Dnd1	62	33.040
MGP_PWKPhJ_G0027814	-	59	56.329	MGP_PWKPhJ_G0026227	Rbm46	60	57.491
MGP_PWKPhJ_G0027814	-	59	59.119	MGP_PWKPhJ_G0028419	Rbm47	88	59.859