EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_PWKPhJ_G0028419 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_pwkphj
Status
putative
Strand
Minus strand
Length
175569 bases
Position
chr5:62271091-62446659
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PWKPhJ_P0071560RRM_1PF00076.223.6e-3713
MGP_PWKPhJ_P0071560RRM_1PF00076.223.6e-3723
MGP_PWKPhJ_P0071560RRM_1PF00076.223.6e-3733
MGP_PWKPhJ_P0071556RRM_1PF00076.225.8e-3713
MGP_PWKPhJ_P0071556RRM_1PF00076.225.8e-3723
MGP_PWKPhJ_P0071556RRM_1PF00076.225.8e-3733
MGP_PWKPhJ_P0071557RRM_1PF00076.225.8e-3713
MGP_PWKPhJ_P0071557RRM_1PF00076.225.8e-3723
MGP_PWKPhJ_P0071557RRM_1PF00076.225.8e-3733
MGP_PWKPhJ_P0071558RRM_1PF00076.225.8e-3713
MGP_PWKPhJ_P0071558RRM_1PF00076.225.8e-3723
MGP_PWKPhJ_P0071558RRM_1PF00076.225.8e-3733
MGP_PWKPhJ_P0071559RRM_1PF00076.225.8e-3713
MGP_PWKPhJ_P0071559RRM_1PF00076.225.8e-3723
MGP_PWKPhJ_P0071559RRM_1PF00076.225.8e-3733
MGP_PWKPhJ_P0071561RRM_1PF00076.225.8e-3713
MGP_PWKPhJ_P0071561RRM_1PF00076.225.8e-3723
MGP_PWKPhJ_P0071561RRM_1PF00076.225.8e-3733
MGP_PWKPhJ_P0071562RRM_1PF00076.225.8e-3713
MGP_PWKPhJ_P0071562RRM_1PF00076.225.8e-3723
MGP_PWKPhJ_P0071562RRM_1PF00076.225.8e-3733
MGP_PWKPhJ_P0071564RRM_1PF00076.223e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PWKPhJ_T0071568-452--- (aa)--
MGP_PWKPhJ_T0071558-4947-MGP_PWKPhJ_P0071558590 (aa)--
MGP_PWKPhJ_T0071557-5515-MGP_PWKPhJ_P0071557590 (aa)--
MGP_PWKPhJ_T0071556-5007XM_006503956MGP_PWKPhJ_P0071556590 (aa)XP_006504019Q91WT8
MGP_PWKPhJ_T0071562-2130-MGP_PWKPhJ_P0071562590 (aa)--
MGP_PWKPhJ_T0071563-2353--- (aa)--
MGP_PWKPhJ_T0071559-5199-MGP_PWKPhJ_P0071559590 (aa)--
MGP_PWKPhJ_T0071561-3279-MGP_PWKPhJ_P0071561590 (aa)--
MGP_PWKPhJ_T0071566-332-MGP_PWKPhJ_P007156613 (aa)--
MGP_PWKPhJ_T0071567-529-MGP_PWKPhJ_P00715676 (aa)--
MGP_PWKPhJ_T0071564-703-MGP_PWKPhJ_P0071564158 (aa)--
MGP_PWKPhJ_T0071565-504--- (aa)--
MGP_PWKPhJ_T0071569-464--- (aa)--
MGP_PWKPhJ_T0071560-3072-MGP_PWKPhJ_P0071560521 (aa)--
Gene Model
Click here to download MGP_PWKPhJ_G0028419's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0028419's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PWKPhJ_G0028419Rbm478858.451MGP_PWKPhJ_G0033812Syncrip7557.522
MGP_PWKPhJ_G0028419Rbm478150.781MGP_PWKPhJ_G0023242Dnd15841.748
MGP_PWKPhJ_G0028419Rbm478967.376MGP_PWKPhJ_G0023988A1cf7656.632
MGP_PWKPhJ_G0028419Rbm478859.859MGP_PWKPhJ_G0027814-5959.119
MGP_PWKPhJ_G0028419Rbm479473.649MGP_PWKPhJ_G0026227Rbm466672.468

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