EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0028610 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpdl
Alias: AA407431|AA959857|D5Ertd650e|D5Wsu145e|Hnrnpdl1|Hnrpdl|HnrpdlGN|JKTBP|hnRNP DL|hnRNP-DL
Full Name: heterogeneous nuclear ribonucleoprotein D-like
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 6083 bases
Position: chr5:96338362-96344444
Accession: 1355299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0072460	RRM_1	PF00076.22	2.4e-33	1	2
MGP_PWKPhJ_P0072460	RRM_1	PF00076.22	2.4e-33	2	2
MGP_PWKPhJ_P0072459	RRM_1	PF00076.22	5.4e-33	1	2
MGP_PWKPhJ_P0072459	RRM_1	PF00076.22	5.4e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0072459	-	2754	-	MGP_PWKPhJ_P0072459	420 (aa)	-	-
MGP_PWKPhJ_T0072458	-	1844	-	-	- (aa)	-	-
MGP_PWKPhJ_T0072464	-	847	-	-	- (aa)	-	-
MGP_PWKPhJ_T0072462	-	885	-	-	- (aa)	-	-
MGP_PWKPhJ_T0072463	-	1477	-	MGP_PWKPhJ_P0072463	100 (aa)	-	-
MGP_PWKPhJ_T0072460	-	2374	-	MGP_PWKPhJ_P0072460	322 (aa)	-	-
MGP_PWKPhJ_T0072461	-	2149	-	MGP_PWKPhJ_P0072461	420 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0028610	Hnrnpdl	89	75.194	MGP_PWKPhJ_G0028608	Hnrnpd	97	66.452
MGP_PWKPhJ_G0028610	Hnrnpdl	76	36.437	MGP_PWKPhJ_G0016603	-	99	39.881
MGP_PWKPhJ_G0028610	Hnrnpdl	61	30.000	MGP_PWKPhJ_G0027964	Tardbp	82	31.098
MGP_PWKPhJ_G0028610	Hnrnpdl	74	42.623	MGP_PWKPhJ_G0018004	Msi2	100	54.867
MGP_PWKPhJ_G0028610	Hnrnpdl	51	34.706	MGP_PWKPhJ_G0019646	Hnrnpa0	56	34.706
MGP_PWKPhJ_G0028610	Hnrnpdl	89	57.292	MGP_PWKPhJ_G0017360	Hnrnpab	82	58.419
MGP_PWKPhJ_G0028610	Hnrnpdl	75	39.676	MGP_PWKPhJ_G0028786	Msi1	58	48.052
MGP_PWKPhJ_G0028610	Hnrnpdl	54	36.709	MGP_PWKPhJ_G0016597	Cirbp	73	36.709