EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_PWKPhJ_G0028657 (Gene tree)
Gene ID
-
Gene Symbol
Hfm1
Alias
A330009G12Rik|Gm1046|LOC381663|Mer3|Sec63d1
Full Name
HFM1%2C ATP-dependent DNA helicase homolog
Gene Type
protein_coding
Species
Mus_musculus_pwkphj
Status
putative
Strand
Minus strand
Length
85190 bases
Position
chr5:103602590-103687779
Accession
3036246
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PWKPhJ_P0072678ResIIIPF04851.153.7e-1111
MGP_PWKPhJ_P0072679ResIIIPF04851.153.7e-1111
MGP_PWKPhJ_P0072684ResIIIPF04851.153.1e-0811
MGP_PWKPhJ_P0072678DEADPF00270.298.1e-2511
MGP_PWKPhJ_P0072679DEADPF00270.298.1e-2511
MGP_PWKPhJ_P0072684DEADPF00270.292.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PWKPhJ_T0072677-2613XM_006535015MGP_PWKPhJ_P007267749 (aa)XP_006535078D3Z4R1
MGP_PWKPhJ_T0072684-1381-MGP_PWKPhJ_P0072684410 (aa)--
MGP_PWKPhJ_T0072682-1705--- (aa)--
MGP_PWKPhJ_T0072683-1325-MGP_PWKPhJ_P007268323 (aa)--
MGP_PWKPhJ_T0072680-4655-MGP_PWKPhJ_P00726801476 (aa)--
MGP_PWKPhJ_T0072681-1928-MGP_PWKPhJ_P0072681625 (aa)--
MGP_PWKPhJ_T0072679-5018-MGP_PWKPhJ_P00726791434 (aa)--
MGP_PWKPhJ_T0072678-4859-MGP_PWKPhJ_P00726781434 (aa)--
Gene Model
Click here to download MGP_PWKPhJ_G0028657's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0028657's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PWKPhJ_G0028657Hfm15335.438MGP_PWKPhJ_G0016326Ascc36335.438
MGP_PWKPhJ_G0028657Hfm15938.298MGP_PWKPhJ_G0025368Snrnp2007738.298

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