EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0028669 (Gene tree)
Gene ID: -
Gene Symbol: Gfi1
Alias: AW495828|Gfi-1|Pal-1|Pal1
Full Name: growth factor independent 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 9467 bases
Position: chr5:104494606-104504072
Accession: 103170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0072734	zf-C2H2	PF00096.26	5e-28	1	6
MGP_PWKPhJ_P0072734	zf-C2H2	PF00096.26	5e-28	2	6
MGP_PWKPhJ_P0072734	zf-C2H2	PF00096.26	5e-28	3	6
MGP_PWKPhJ_P0072734	zf-C2H2	PF00096.26	5e-28	4	6
MGP_PWKPhJ_P0072734	zf-C2H2	PF00096.26	5e-28	5	6
MGP_PWKPhJ_P0072734	zf-C2H2	PF00096.26	5e-28	6	6
MGP_PWKPhJ_P0072735	zf-C2H2	PF00096.26	5e-28	1	6
MGP_PWKPhJ_P0072735	zf-C2H2	PF00096.26	5e-28	2	6
MGP_PWKPhJ_P0072735	zf-C2H2	PF00096.26	5e-28	3	6
MGP_PWKPhJ_P0072735	zf-C2H2	PF00096.26	5e-28	4	6
MGP_PWKPhJ_P0072735	zf-C2H2	PF00096.26	5e-28	5	6
MGP_PWKPhJ_P0072735	zf-C2H2	PF00096.26	5e-28	6	6
MGP_PWKPhJ_P0072736	zf-C2H2	PF00096.26	1.5e-27	1	6
MGP_PWKPhJ_P0072736	zf-C2H2	PF00096.26	1.5e-27	2	6
MGP_PWKPhJ_P0072736	zf-C2H2	PF00096.26	1.5e-27	3	6
MGP_PWKPhJ_P0072736	zf-C2H2	PF00096.26	1.5e-27	4	6
MGP_PWKPhJ_P0072736	zf-C2H2	PF00096.26	1.5e-27	5	6
MGP_PWKPhJ_P0072736	zf-C2H2	PF00096.26	1.5e-27	6	6
MGP_PWKPhJ_P0072737	zf-C2H2	PF00096.26	9.6e-25	1	4
MGP_PWKPhJ_P0072737	zf-C2H2	PF00096.26	9.6e-25	2	4
MGP_PWKPhJ_P0072737	zf-C2H2	PF00096.26	9.6e-25	3	4
MGP_PWKPhJ_P0072737	zf-C2H2	PF00096.26	9.6e-25	4	4
MGP_PWKPhJ_P0072737	zf-met	PF12874.7	2.3e-08	1	1
MGP_PWKPhJ_P0072734	zf-met	PF12874.7	2.6e-07	1	1
MGP_PWKPhJ_P0072735	zf-met	PF12874.7	2.6e-07	1	1
MGP_PWKPhJ_P0072736	zf-met	PF12874.7	4.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0072738	-	689	-	MGP_PWKPhJ_P0072738	186 (aa)	-	-
MGP_PWKPhJ_T0072736	-	2651	-	MGP_PWKPhJ_P0072736	489 (aa)	-	-
MGP_PWKPhJ_T0072737	-	1494	-	MGP_PWKPhJ_P0072737	135 (aa)	-	-
MGP_PWKPhJ_T0072734	-	2872	XM_006534791	MGP_PWKPhJ_P0072734	423 (aa)	XP_006534854	A0A0R4J292
MGP_PWKPhJ_T0072735	-	2660	-	MGP_PWKPhJ_P0072735	423 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0028669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0028669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0028669	Gfi1	99	45.714	MGP_PWKPhJ_G0030622	Zfp574	62	43.925
MGP_PWKPhJ_G0028669	Gfi1	100	44.094	MGP_PWKPhJ_G0022233	Zfp945	81	40.230
MGP_PWKPhJ_G0028669	Gfi1	100	46.809	MGP_PWKPhJ_G0033190	Zfp872	79	44.025
MGP_PWKPhJ_G0028669	Gfi1	99	47.287	MGP_PWKPhJ_G0029510	Repin1	90	47.287
MGP_PWKPhJ_G0028669	Gfi1	100	48.819	MGP_PWKPhJ_G0030591	Zfp93	70	45.294
MGP_PWKPhJ_G0028669	Gfi1	99	47.368	MGP_PWKPhJ_G0030371	Zfp865	69	46.753
MGP_PWKPhJ_G0028669	Gfi1	100	46.018	MGP_PWKPhJ_G0019718	Zfp759	88	46.018
MGP_PWKPhJ_G0028669	Gfi1	99	44.444	MGP_PWKPhJ_G0030374	Zfp784	71	44.444
MGP_PWKPhJ_G0028669	Gfi1	100	48.031	MGP_PWKPhJ_G0030586	Zfp235	60	46.377
MGP_PWKPhJ_G0028669	Gfi1	100	46.094	MGP_PWKPhJ_G0032486	Zfp882	85	46.094
MGP_PWKPhJ_G0028669	Gfi1	100	45.522	MGP_PWKPhJ_G0032485	Zfp709	76	43.976
MGP_PWKPhJ_G0028669	Gfi1	100	46.053	MGP_PWKPhJ_G0025843	Zfp64	70	35.429
MGP_PWKPhJ_G0028669	Gfi1	100	42.857	MGP_PWKPhJ_G0022237	Zscan10	77	42.771
MGP_PWKPhJ_G0028669	Gfi1	100	48.031	MGP_PWKPhJ_G0019737	Zfp748	92	48.447
MGP_PWKPhJ_G0028669	Gfi1	100	46.739	MGP_PWKPhJ_G0023554	Zfp236	65	48.148
MGP_PWKPhJ_G0028669	Gfi1	100	48.062	MGP_PWKPhJ_G0030363	Zfp628	54	48.062
MGP_PWKPhJ_G0028669	Gfi1	100	46.296	MGP_PWKPhJ_G0030592	Zfp61	57	46.296
MGP_PWKPhJ_G0028669	Gfi1	100	46.269	MGP_PWKPhJ_G0019743	Zfp493	88	46.269
MGP_PWKPhJ_G0028669	Gfi1	100	48.031	MGP_PWKPhJ_G0017355	Zfp354a	61	48.031
MGP_PWKPhJ_G0028669	Gfi1	100	46.457	MGP_PWKPhJ_G0030593	Zfp94	65	44.970
MGP_PWKPhJ_G0028669	Gfi1	100	47.788	MGP_PWKPhJ_G0019717	Rslcan18	71	47.788
MGP_PWKPhJ_G0028669	Gfi1	100	48.507	MGP_PWKPhJ_G0030753	Zfp420	98	48.507
MGP_PWKPhJ_G0028669	Gfi1	100	43.590	MGP_PWKPhJ_G0029981	Zfp637	71	43.590
MGP_PWKPhJ_G0028669	Gfi1	100	48.276	MGP_PWKPhJ_G0017438	Zfp672	90	48.276
MGP_PWKPhJ_G0028669	Gfi1	100	47.863	MGP_PWKPhJ_G0025805	Zfp334	65	47.333
MGP_PWKPhJ_G0028669	Gfi1	100	45.312	MGP_PWKPhJ_G0022212	Zfp677	79	45.312
MGP_PWKPhJ_G0028669	Gfi1	100	44.030	MGP_PWKPhJ_G0022214	Zfp51	74	44.828
MGP_PWKPhJ_G0028669	Gfi1	100	46.457	MGP_PWKPhJ_G0032857	Zfp1	60	46.457
MGP_PWKPhJ_G0028669	Gfi1	99	45.133	MGP_PWKPhJ_G0029639	Prdm5	74	43.846
MGP_PWKPhJ_G0028669	Gfi1	99	48.507	MGP_PWKPhJ_G0025379	Zfp661	62	48.507
MGP_PWKPhJ_G0028669	Gfi1	100	49.254	MGP_PWKPhJ_G0021012	Zfp251	74	47.024
MGP_PWKPhJ_G0028669	Gfi1	100	50.746	MGP_PWKPhJ_G0033128	Zfp26	70	47.159
MGP_PWKPhJ_G0028669	Gfi1	100	45.794	MGP_PWKPhJ_G0017346	Zfp454	85	42.262
MGP_PWKPhJ_G0028669	Gfi1	100	54.321	MGP_PWKPhJ_G0031767	Zfp768	51	45.833
MGP_PWKPhJ_G0028669	Gfi1	100	45.238	MGP_PWKPhJ_G0017480	Zfp867	79	43.023
MGP_PWKPhJ_G0028669	Gfi1	99	50.000	MGP_PWKPhJ_G0030872	-	78	50.000
MGP_PWKPhJ_G0028669	Gfi1	100	44.882	MGP_PWKPhJ_G0030874	Zfp715	63	43.210
MGP_PWKPhJ_G0028669	Gfi1	100	49.606	MGP_PWKPhJ_G0030587	-	82	49.606
MGP_PWKPhJ_G0028669	Gfi1	100	49.219	MGP_PWKPhJ_G0028339	Zbtb49	62	51.786
MGP_PWKPhJ_G0028669	Gfi1	100	39.535	MGP_PWKPhJ_G0032702	Zfp319	93	40.116