EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0028916 (Gene tree)
Gene ID: -
Gene Symbol: Ddx55
Alias: 2810021H22Rik|Kiaa1595|mKIAA1595
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 15018 bases
Position: chr5:121874077-121889094
Accession: 1915098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0074112	ResIII	PF04851.15	5.3e-07	1	1
MGP_PWKPhJ_P0074110	ResIII	PF04851.15	8e-07	1	1
MGP_PWKPhJ_P0074110	DEAD	PF00270.29	1e-41	1	1
MGP_PWKPhJ_P0074112	DEAD	PF00270.29	1.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0074110	-	2799	-	MGP_PWKPhJ_P0074110	600 (aa)	-	Q6ZPL9
MGP_PWKPhJ_T0074111	-	3521	-	MGP_PWKPhJ_P0074111	135 (aa)	-	-
MGP_PWKPhJ_T0074112	-	1857	-	MGP_PWKPhJ_P0074112	618 (aa)	-	-
MGP_PWKPhJ_T0074113	-	445	-	-	- (aa)	-	-
MGP_PWKPhJ_T0074114	-	477	-	-	- (aa)	-	-
MGP_PWKPhJ_T0074115	-	1433	-	-	- (aa)	-	-
MGP_PWKPhJ_T0074116	-	824	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0028916's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0028916's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0028916	Ddx55	75	31.721	MGP_PWKPhJ_G0024477	Ddx31	74	31.721
MGP_PWKPhJ_G0028916	Ddx55	59	30.362	MGP_PWKPhJ_G0021677	Eif4a2	93	30.362
MGP_PWKPhJ_G0028916	Ddx55	58	31.143	MGP_PWKPhJ_G0015676	Ddx59	54	31.143
MGP_PWKPhJ_G0028916	Ddx55	59	30.137	MGP_PWKPhJ_G0018382	Ddx5	66	30.137
MGP_PWKPhJ_G0028916	Ddx55	59	32.044	MGP_PWKPhJ_G0033770	Ddx43	53	32.044
MGP_PWKPhJ_G0028916	Ddx55	58	33.056	MGP_PWKPhJ_G0032421	Ddx49	92	33.238
MGP_PWKPhJ_G0028916	Ddx55	79	33.648	MGP_PWKPhJ_G0015548	Ddx18	71	32.895
MGP_PWKPhJ_G0028916	Ddx55	59	35.635	MGP_PWKPhJ_G0019621	Ddx41	55	35.440
MGP_PWKPhJ_G0028916	Ddx55	63	30.750	MGP_PWKPhJ_G0017941	Ddx52	62	30.750
MGP_PWKPhJ_G0028916	Ddx55	58	35.977	MGP_PWKPhJ_G0030210	Ddx47	81	35.977
MGP_PWKPhJ_G0028916	Ddx55	59	32.687	MGP_PWKPhJ_G0021078	Ddx17	53	32.687
MGP_PWKPhJ_G0028916	Ddx55	60	30.886	MGP_PWKPhJ_G0032787	Ddx28	69	30.886
MGP_PWKPhJ_G0028916	Ddx55	75	38.631	MGP_PWKPhJ_G0033516	Ddx10	50	38.631
MGP_PWKPhJ_G0028916	Ddx55	59	35.733	MGP_PWKPhJ_G0016052	D1Pas1	54	35.733