EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0029030 (Gene tree)
Gene ID: -
Gene Symbol: Plod3
Alias: AI414586|LH3|lysyl hydroxylase 3
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 3
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 9808 bases
Position: chr5:134541631-134551438
Accession: 1347008
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0074770	2OG-FeII_Oxy	PF03171.20	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0074774	-	842	-	-	- (aa)	-	-
MGP_PWKPhJ_T0074775	-	603	-	MGP_PWKPhJ_P0074775	200 (aa)	-	-
MGP_PWKPhJ_T0074770	-	3280	XM_006504423	MGP_PWKPhJ_P0074770	741 (aa)	XP_006504486	Q9R0E1
MGP_PWKPhJ_T0074771	-	2362	-	-	- (aa)	-	-
MGP_PWKPhJ_T0074772	-	2868	-	-	- (aa)	-	-
MGP_PWKPhJ_T0074773	-	932	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0029030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0029030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0029030	Plod3	100	58.030	MGP_PWKPhJ_G0033833	Plod2	96	59.161
MGP_PWKPhJ_G0029030	Plod3	95	60.369	MGP_PWKPhJ_G0027945	Plod1	97	60.369