EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0029289 (Gene tree)
Gene ID: -
Gene Symbol: Lsm8
Alias: 2010003I05Rik|AW214405|Lsm8|Naa38
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 7229 bases
Position: chr6:15077425-15084653
Accession: 1923772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0076083	LSM	PF01423.22	2.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0076081	-	2936	-	-	- (aa)	-	-
MGP_PWKPhJ_T0076082	-	907	-	-	- (aa)	-	-
MGP_PWKPhJ_T0076083	-	626	-	MGP_PWKPhJ_P0076083	100 (aa)	-	-
MGP_PWKPhJ_T0076084	-	1610	-	MGP_PWKPhJ_P0076084	96 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0029289's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0029289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0029289	Lsm8	92	34.091	MGP_PWKPhJ_G0032215	Lsm1	65	34.091
MGP_PWKPhJ_G0029289	Lsm8	73	35.526	MGP_PWKPhJ_G0016635	-	72	35.526