EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0029409 (Gene tree)
Gene ID: -
Gene Symbol: Mkrn1
Alias: RFP
Full Name: makorin%2C ring finger protein%2C 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 23284 bases
Position: chr6:35631110-35654393
Accession: 1859353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0076704	zf-CCCH	PF00642.24	1.4e-17	1	3
MGP_PWKPhJ_P0076704	zf-CCCH	PF00642.24	1.4e-17	2	3
MGP_PWKPhJ_P0076704	zf-CCCH	PF00642.24	1.4e-17	3	3
MGP_PWKPhJ_P0076708	zf-CCCH	PF00642.24	1.9e-16	1	3
MGP_PWKPhJ_P0076708	zf-CCCH	PF00642.24	1.9e-16	2	3
MGP_PWKPhJ_P0076708	zf-CCCH	PF00642.24	1.9e-16	3	3
MGP_PWKPhJ_P0076705	zf-CCCH	PF00642.24	2e-15	1	2
MGP_PWKPhJ_P0076705	zf-CCCH	PF00642.24	2e-15	2	2
MGP_PWKPhJ_P0076707	zf-CCCH	PF00642.24	2.3e-12	1	2
MGP_PWKPhJ_P0076707	zf-CCCH	PF00642.24	2.3e-12	2	2
MGP_PWKPhJ_P0076711	zf-CCCH	PF00642.24	1.9e-11	1	2
MGP_PWKPhJ_P0076711	zf-CCCH	PF00642.24	1.9e-11	2	2
MGP_PWKPhJ_P0076710	zf-CCCH	PF00642.24	1.3e-10	1	2
MGP_PWKPhJ_P0076710	zf-CCCH	PF00642.24	1.3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0076707	-	1485	-	MGP_PWKPhJ_P0076707	343 (aa)	-	-
MGP_PWKPhJ_T0076706	-	773	-	MGP_PWKPhJ_P0076706	206 (aa)	-	-
MGP_PWKPhJ_T0076705	-	2988	-	MGP_PWKPhJ_P0076705	417 (aa)	-	-
MGP_PWKPhJ_T0076704	-	3042	XM_006506396	MGP_PWKPhJ_P0076704	481 (aa)	XP_006506459	Q9QXP6
MGP_PWKPhJ_T0076710	-	542	-	MGP_PWKPhJ_P0076710	180 (aa)	-	-
MGP_PWKPhJ_T0076711	-	1017	-	MGP_PWKPhJ_P0076711	176 (aa)	-	-
MGP_PWKPhJ_T0076709	-	582	-	-	- (aa)	-	-
MGP_PWKPhJ_T0076708	-	1511	-	MGP_PWKPhJ_P0076708	329 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0029409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0029409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0029409	Mkrn1	93	44.335	MGP_PWKPhJ_G0029954	Mkrn2	95	45.679
MGP_PWKPhJ_G0029409	Mkrn1	100	46.204	MGP_PWKPhJ_G0031081	Mkrn3	83	47.447