EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0029634 (Gene tree)
Gene ID: -
Gene Symbol: Smarcad1
Alias: AV081750|AW226546|D6Pas1|Etl1|Kiaa1122|mKIAA1122
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 70077 bases
Position: chr6:60990680-61060756
Accession: 95453
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0077493	ResIII	PF04851.15	9.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0077505	-	3062	-	-	- (aa)	-	-
MGP_PWKPhJ_T0077498	-	472	-	MGP_PWKPhJ_P0077498	68 (aa)	-	-
MGP_PWKPhJ_T0077499	-	739	-	MGP_PWKPhJ_P0077499	73 (aa)	-	-
MGP_PWKPhJ_T0077494	-	466	-	-	- (aa)	-	-
MGP_PWKPhJ_T0077495	-	4985	-	MGP_PWKPhJ_P0077495	1021 (aa)	-	-
MGP_PWKPhJ_T0077496	-	600	-	MGP_PWKPhJ_P0077496	73 (aa)	-	-
MGP_PWKPhJ_T0077497	-	734	-	MGP_PWKPhJ_P0077497	73 (aa)	-	-
MGP_PWKPhJ_T0077502	-	642	-	-	- (aa)	-	-
MGP_PWKPhJ_T0077503	-	640	-	-	- (aa)	-	-
MGP_PWKPhJ_T0077492	-	602	XM_006505509	MGP_PWKPhJ_P0077492	134 (aa)	XP_006505572	Q04692
MGP_PWKPhJ_T0077493	-	5338	-	MGP_PWKPhJ_P0077493	1050 (aa)	-	-
MGP_PWKPhJ_T0077506	-	648	-	-	- (aa)	-	-
MGP_PWKPhJ_T0077500	-	2820	-	-	- (aa)	-	-
MGP_PWKPhJ_T0077507	-	2540	-	-	- (aa)	-	-
MGP_PWKPhJ_T0077501	-	4179	-	MGP_PWKPhJ_P0077501	123 (aa)	-	-
MGP_PWKPhJ_T0077504	-	726	-	MGP_PWKPhJ_P0077504	45 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0029634	Smarcad1	50	30.325	MGP_PWKPhJ_G0026928	Rad54b	56	32.190
MGP_PWKPhJ_G0029634	Smarcad1	50	30.112	MGP_PWKPhJ_G0027474	Rad54l	66	30.112
MGP_PWKPhJ_G0029634	Smarcad1	51	37.477	MGP_PWKPhJ_G0034347	Smarca1	60	38.889
MGP_PWKPhJ_G0029634	Smarcad1	51	37.705	MGP_PWKPhJ_G0024048	Hells	66	37.887
MGP_PWKPhJ_G0029634	Smarcad1	52	33.272	MGP_PWKPhJ_G0026525	Chd1l	51	35.135