EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0029808 (Gene tree)
Gene ID: -
Gene Symbol: Rab7
Alias: Rab7a
Full Name: RAB7%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 46571 bases
Position: chr6:84190281-84236851
Accession: 105068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0078354	MMR_HSR1	PF01926.23	7.8e-07	1	1
MGP_PWKPhJ_P0078353	MMR_HSR1	PF01926.23	1.1e-06	1	1
MGP_PWKPhJ_P0078355	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0078354	-	550	-	MGP_PWKPhJ_P0078354	98 (aa)	-	-
MGP_PWKPhJ_T0078355	-	372	-	MGP_PWKPhJ_P0078355	79 (aa)	-	-
MGP_PWKPhJ_T0078353	-	2189	-	MGP_PWKPhJ_P0078353	244 (aa)	-	P51150

Gene Model

Click here to download MGP_PWKPhJ_G0029808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0029808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0029808	Rab7	100	40.000	MGP_PWKPhJ_G0026098	Rab33b	65	38.816
MGP_PWKPhJ_G0029808	Rab7	91	40.449	MGP_PWKPhJ_G0021239	Rabl2	65	34.416
MGP_PWKPhJ_G0029808	Rab7	90	50.704	MGP_PWKPhJ_G0022930	Rab31	78	43.949
MGP_PWKPhJ_G0029808	Rab7	97	35.789	MGP_PWKPhJ_G0030381	Rasl2-9	70	33.962
MGP_PWKPhJ_G0029808	Rab7	91	45.833	MGP_PWKPhJ_G0016465	Rab36	58	37.037
MGP_PWKPhJ_G0029808	Rab7	91	44.944	MGP_PWKPhJ_G0026914	Rab2a	73	39.241
MGP_PWKPhJ_G0029808	Rab7	90	50.704	MGP_PWKPhJ_G0031319	Rab6a	94	32.068
MGP_PWKPhJ_G0029808	Rab7	90	40.278	MGP_PWKPhJ_G0034524	Rab39b	73	34.810
MGP_PWKPhJ_G0029808	Rab7	90	50.704	MGP_PWKPhJ_G0022939	Rab12	63	38.217
MGP_PWKPhJ_G0029808	Rab7	95	37.333	MGP_PWKPhJ_G0018632	Dnajc27	59	37.888
MGP_PWKPhJ_G0029808	Rab7	99	47.436	MGP_PWKPhJ_G0022839	Rab5a	74	41.463
MGP_PWKPhJ_G0029808	Rab7	59	33.793	MGP_PWKPhJ_G0030278	Kras	80	34.615
MGP_PWKPhJ_G0029808	Rab7	91	45.833	MGP_PWKPhJ_G0024594	Rab14	83	40.310
MGP_PWKPhJ_G0029808	Rab7	100	39.241	MGP_PWKPhJ_G0017160	Rab1a	75	38.608
MGP_PWKPhJ_G0029808	Rab7	95	53.947	MGP_PWKPhJ_G0018439	Rab37	73	40.741
MGP_PWKPhJ_G0029808	Rab7	90	49.296	MGP_PWKPhJ_G0025872	Rab22a	78	40.764
MGP_PWKPhJ_G0029808	Rab7	90	49.296	MGP_PWKPhJ_G0018235	Rab5c	70	43.312
MGP_PWKPhJ_G0029808	Rab7	95	62.667	MGP_PWKPhJ_G0034923	Rab9	75	56.522
MGP_PWKPhJ_G0029808	Rab7	97	63.636	MGP_PWKPhJ_G0034766	Rab9b	81	58.896
MGP_PWKPhJ_G0029808	Rab7	79	31.169	MGP_PWKPhJ_G0033871	Mras	74	33.758
MGP_PWKPhJ_G0029808	Rab7	94	43.478	MGP_PWKPhJ_G0015037	Rab23	65	34.591
MGP_PWKPhJ_G0029808	Rab7	59	32.414	MGP_PWKPhJ_G0031945	Hras	80	33.333
MGP_PWKPhJ_G0029808	Rab7	91	44.944	MGP_PWKPhJ_G0026295	Rab25	72	38.750
MGP_PWKPhJ_G0029808	Rab7	90	50.704	MGP_PWKPhJ_G0033895	Rab6b	94	32.911
MGP_PWKPhJ_G0029808	Rab7	91	46.067	MGP_PWKPhJ_G0020303	Rab2b	80	40.881
MGP_PWKPhJ_G0029808	Rab7	90	48.864	MGP_PWKPhJ_G0023083	Rab18	74	41.401
MGP_PWKPhJ_G0029808	Rab7	91	45.833	MGP_PWKPhJ_G0033651	Rab11a	87	38.686
MGP_PWKPhJ_G0029808	Rab7	91	45.833	MGP_PWKPhJ_G0022511	Rab11b	71	40.252
MGP_PWKPhJ_G0029808	Rab7	56	30.405	MGP_PWKPhJ_G0020030	Nkiras1	71	30.405
MGP_PWKPhJ_G0029808	Rab7	91	45.833	MGP_PWKPhJ_G0031259	Rab30	75	41.139
MGP_PWKPhJ_G0029808	Rab7	91	43.836	MGP_PWKPhJ_G0034357	Rab33a	66	40.373
MGP_PWKPhJ_G0029808	Rab7	100	44.304	MGP_PWKPhJ_G0018926	Rab15	76	34.320
MGP_PWKPhJ_G0029808	Rab7	100	39.241	MGP_PWKPhJ_G0023645	Rab1b	77	37.975