EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_PWKPhJ_G0030030 (Gene tree)
Gene ID
-
Gene Symbol
Apobec1
Alias
Cdar1
Full Name
apolipoprotein B mRNA editing enzyme%2C catalytic polypeptide 1
Gene Type
protein_coding
Species
Mus_musculus_pwkphj
Status
putative
Strand
Minus strand
Length
38464 bases
Position
chr6:118666557-118705020
Accession
103298
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PWKPhJ_P0079572APOBEC_NPF08210.119.2e-3011
MGP_PWKPhJ_P0079573APOBEC_NPF08210.119.2e-3011
MGP_PWKPhJ_P0079574APOBEC_NPF08210.119.2e-3011
MGP_PWKPhJ_P0079575APOBEC_NPF08210.114.2e-1711
MGP_PWKPhJ_P0079576APOBEC_NPF08210.113.1e-1311
MGP_PWKPhJ_P0079572APOBEC_CPF05240.141.9e-2211
MGP_PWKPhJ_P0079573APOBEC_CPF05240.141.9e-2211
MGP_PWKPhJ_P0079574APOBEC_CPF05240.141.9e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PWKPhJ_T0079580-520--- (aa)--
MGP_PWKPhJ_T0079579-561--- (aa)--
MGP_PWKPhJ_T0079578-361-MGP_PWKPhJ_P007957825 (aa)--
MGP_PWKPhJ_T0079575-667-MGP_PWKPhJ_P0079575121 (aa)--
MGP_PWKPhJ_T0079574-2142-MGP_PWKPhJ_P0079574229 (aa)--
MGP_PWKPhJ_T0079577-372-MGP_PWKPhJ_P007957743 (aa)--
MGP_PWKPhJ_T0079576-775-MGP_PWKPhJ_P0079576113 (aa)--
MGP_PWKPhJ_T0079573-2086-MGP_PWKPhJ_P0079573229 (aa)--
MGP_PWKPhJ_T0079572-2281XM_006505401MGP_PWKPhJ_P0079572229 (aa)XP_006505464P51908
Gene Model
Click here to download MGP_PWKPhJ_G0030030's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0030030's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PWKPhJ_G0030030Apobec15639.706MGP_PWKPhJ_G0030029Aicda5341.509
MGP_PWKPhJ_G0030030Apobec17435.789MGP_PWKPhJ_G0021091Apobec36036.620

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