EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0030219 (Gene tree)
Gene ID: -
Gene Symbol: Gm5580
Alias: -
Full Name: predicted pseudogene 5580
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 1243 bases
Position: chr6:132533547-132534789
Accession: 3646594
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0080266	DEAD	PF00270.29	1.9e-41	1	2
MGP_PWKPhJ_P0080266	DEAD	PF00270.29	1.9e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0080266	-	1243	-	MGP_PWKPhJ_P0080266	349 (aa)	-	A0A0N4SVP8

Gene Model

Click here to download MGP_PWKPhJ_G0030219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0030219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0030219	Gm5580	91	32.500	MGP_PWKPhJ_G0022604	Ddx39b	99	31.016
MGP_PWKPhJ_G0030219	Gm5580	88	30.769	MGP_PWKPhJ_G0033245	Ddx25	53	31.348
MGP_PWKPhJ_G0030219	Gm5580	91	52.888	MGP_PWKPhJ_G0017628	Eif4a1	64	55.696
MGP_PWKPhJ_G0030219	Gm5580	86	33.007	MGP_PWKPhJ_G0032847	Ddx19b	69	33.660
MGP_PWKPhJ_G0030219	Gm5580	92	78.750	MGP_PWKPhJ_G0018547	Eif4a3	80	71.562
MGP_PWKPhJ_G0030219	Gm5580	91	57.729	MGP_PWKPhJ_G0021677	Eif4a2	71	57.729
MGP_PWKPhJ_G0030219	Gm5580	91	32.188	MGP_PWKPhJ_G0032559	Ddx39	74	34.715