EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0030598 (Gene tree)
Gene ID: -
Gene Symbol: Irgc1
Alias: F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc|LOC210145|LOC381989
Full Name: immunity-related GTPase family%2C cinema 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 43598 bases
Position: chr7:17013530-17057127
Accession: 2685948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0081742	MMR_HSR1	PF01926.23	6.5e-06	1	1
MGP_PWKPhJ_P0081743	MMR_HSR1	PF01926.23	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0081745	-	661	-	-	- (aa)	-	-
MGP_PWKPhJ_T0081744	-	383	-	MGP_PWKPhJ_P0081744	82 (aa)	-	-
MGP_PWKPhJ_T0081746	-	342	-	-	- (aa)	-	-
MGP_PWKPhJ_T0081738	-	1353	XM_006539708	MGP_PWKPhJ_P0081738	417 (aa)	XP_006539771	A0A0U1RQ16
MGP_PWKPhJ_T0081743	-	1737	-	MGP_PWKPhJ_P0081743	463 (aa)	-	-
MGP_PWKPhJ_T0081742	-	1835	-	MGP_PWKPhJ_P0081742	463 (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0030598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0030598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0030598	Irgc1	75	41.720	MGP_PWKPhJ_G0017311	Ifi47	75	41.720
MGP_PWKPhJ_G0030598	Irgc1	65	40.741	MGP_PWKPhJ_G0017310	Tgtp2	65	40.741
MGP_PWKPhJ_G0030598	Irgc1	91	31.920	MGP_PWKPhJ_G0023409	-	90	31.920
MGP_PWKPhJ_G0030598	Irgc1	69	32.872	MGP_PWKPhJ_G0017435	Irgm2	69	32.872
MGP_PWKPhJ_G0030598	Irgc1	88	32.587	MGP_PWKPhJ_G0017306	-	76	32.587
MGP_PWKPhJ_G0030598	Irgc1	79	30.183	MGP_PWKPhJ_G0017304	Irgm1	76	35.169
MGP_PWKPhJ_G0030598	Irgc1	75	36.593	MGP_PWKPhJ_G0017305	-	88	36.593
MGP_PWKPhJ_G0030598	Irgc1	91	32.134	MGP_PWKPhJ_G0017308	Gm12185	58	32.134