EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0030666 (Gene tree)
Gene ID: -
Gene Symbol: Snrpa
Alias: C430021M15Rik|Rnu1a-1|Rnu1a1|U1 snRNP|U1-A|U1A
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 11298 bases
Position: chr7:20031608-20042905
Accession: 1855690
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0082023	RRM_1	PF00076.22	2.5e-29	1	3
MGP_PWKPhJ_P0082023	RRM_1	PF00076.22	2.5e-29	2	3
MGP_PWKPhJ_P0082023	RRM_1	PF00076.22	2.5e-29	3	3
MGP_PWKPhJ_P0082024	RRM_1	PF00076.22	3e-25	1	2
MGP_PWKPhJ_P0082024	RRM_1	PF00076.22	3e-25	2	2
MGP_PWKPhJ_P0082025	RRM_1	PF00076.22	3e-25	1	2
MGP_PWKPhJ_P0082025	RRM_1	PF00076.22	3e-25	2	2
MGP_PWKPhJ_P0082026	RRM_1	PF00076.22	4e-19	1	2
MGP_PWKPhJ_P0082026	RRM_1	PF00076.22	4e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0082023	-	1397	-	MGP_PWKPhJ_P0082023	322 (aa)	-	Q62189
MGP_PWKPhJ_T0082025	-	1285	-	MGP_PWKPhJ_P0082025	285 (aa)	-	-
MGP_PWKPhJ_T0082024	-	1256	-	MGP_PWKPhJ_P0082024	285 (aa)	-	-
MGP_PWKPhJ_T0082027	-	509	-	MGP_PWKPhJ_P0082027	43 (aa)	-	-
MGP_PWKPhJ_T0082026	-	968	-	MGP_PWKPhJ_P0082026	247 (aa)	-	-
MGP_PWKPhJ_T0082028	-	1695	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0030666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0030666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0030666	Snrpa	98	85.477	MGP_PWKPhJ_G0033885	Gm5145	81	86.486
MGP_PWKPhJ_G0030666	Snrpa	96	53.430	MGP_PWKPhJ_G0025490	Snrpb2	99	63.121