EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0030753 (Gene tree)
Gene ID: -
Gene Symbol: Zfp420
Alias: B230119D13|B230312I18Rik|mszf59-1|mszf70
Full Name: zinc finger protein 420
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 15947 bases
Position: chr7:22811898-22827844
Accession: 2444666
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_PWKPhJ_P0082382	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	1	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	2	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	3	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	4	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	5	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	6	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	7	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	8	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	9	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	10	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	11	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	12	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	13	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	14	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	15	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	16	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	17	18
MGP_PWKPhJ_P0082385	zf-C2H2	PF00096.26	2.6e-113	18	18
MGP_PWKPhJ_P0082382	zf-met	PF12874.7	8.4e-08	1	1
MGP_PWKPhJ_P0082385	zf-met	PF12874.7	8.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0082384	-	2976	-	-	- (aa)	-	-
MGP_PWKPhJ_T0082385	-	2744	-	MGP_PWKPhJ_P0082385	578 (aa)	-	-
MGP_PWKPhJ_T0082386	-	764	-	-	- (aa)	-	-
MGP_PWKPhJ_T0082382	-	2537	XM_006539873	MGP_PWKPhJ_P0082382	578 (aa)	XP_006539936	Q7TMN8
MGP_PWKPhJ_T0082383	-	689	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0030753's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0030753's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0030753	Zfp420	97	44.706	MGP_PWKPhJ_G0027899	Zbtb17	69	44.706
MGP_PWKPhJ_G0030753	Zfp420	98	48.744	MGP_PWKPhJ_G0028339	Zbtb49	89	50.000
MGP_PWKPhJ_G0030753	Zfp420	99	52.489	MGP_PWKPhJ_G0025805	Zfp334	75	51.264
MGP_PWKPhJ_G0030753	Zfp420	98	49.524	MGP_PWKPhJ_G0017438	Zfp672	89	49.524
MGP_PWKPhJ_G0030753	Zfp420	99	58.394	MGP_PWKPhJ_G0033190	Zfp872	87	58.394
MGP_PWKPhJ_G0030753	Zfp420	98	38.136	MGP_PWKPhJ_G0030363	Zfp628	60	38.748
MGP_PWKPhJ_G0030753	Zfp420	99	50.099	MGP_PWKPhJ_G0030586	Zfp235	72	51.708
MGP_PWKPhJ_G0030753	Zfp420	99	60.112	MGP_PWKPhJ_G0030587	-	84	60.112
MGP_PWKPhJ_G0030753	Zfp420	99	53.398	MGP_PWKPhJ_G0030585	Zfp112	59	53.398
MGP_PWKPhJ_G0030753	Zfp420	98	57.619	MGP_PWKPhJ_G0032857	Zfp1	78	57.619
MGP_PWKPhJ_G0030753	Zfp420	98	54.648	MGP_PWKPhJ_G0022212	Zfp677	89	54.648
MGP_PWKPhJ_G0030753	Zfp420	98	60.947	MGP_PWKPhJ_G0019743	Zfp493	89	60.947
MGP_PWKPhJ_G0030753	Zfp420	98	55.319	MGP_PWKPhJ_G0017355	Zfp354a	63	55.725
MGP_PWKPhJ_G0030753	Zfp420	98	46.711	MGP_PWKPhJ_G0029510	Repin1	93	46.711
MGP_PWKPhJ_G0030753	Zfp420	98	56.275	MGP_PWKPhJ_G0019717	Rslcan18	71	56.275
MGP_PWKPhJ_G0030753	Zfp420	99	50.364	MGP_PWKPhJ_G0019718	Zfp759	88	50.364
MGP_PWKPhJ_G0030753	Zfp420	99	51.591	MGP_PWKPhJ_G0030591	Zfp93	85	51.591
MGP_PWKPhJ_G0030753	Zfp420	99	57.288	MGP_PWKPhJ_G0030593	Zfp94	78	57.288
MGP_PWKPhJ_G0030753	Zfp420	99	54.867	MGP_PWKPhJ_G0030592	Zfp61	59	54.867
MGP_PWKPhJ_G0030753	Zfp420	99	55.872	MGP_PWKPhJ_G0033128	Zfp26	80	55.872
MGP_PWKPhJ_G0030753	Zfp420	95	41.722	MGP_PWKPhJ_G0029639	Prdm5	91	48.387
MGP_PWKPhJ_G0030753	Zfp420	98	54.167	MGP_PWKPhJ_G0022214	Zfp51	88	54.167
MGP_PWKPhJ_G0030753	Zfp420	98	48.507	MGP_PWKPhJ_G0028669	Gfi1	100	48.507
MGP_PWKPhJ_G0030753	Zfp420	99	37.634	MGP_PWKPhJ_G0030371	Zfp865	80	37.634
MGP_PWKPhJ_G0030753	Zfp420	95	30.691	MGP_PWKPhJ_G0030372	-	66	31.343
MGP_PWKPhJ_G0030753	Zfp420	99	48.899	MGP_PWKPhJ_G0019323	Zkscan4	52	48.305
MGP_PWKPhJ_G0030753	Zfp420	98	59.732	MGP_PWKPhJ_G0017346	Zfp454	87	58.310
MGP_PWKPhJ_G0030753	Zfp420	98	60.837	MGP_PWKPhJ_G0030872	-	84	60.837
MGP_PWKPhJ_G0030753	Zfp420	99	51.052	MGP_PWKPhJ_G0030874	Zfp715	71	51.316
MGP_PWKPhJ_G0030753	Zfp420	98	37.309	MGP_PWKPhJ_G0032702	Zfp319	93	36.919
MGP_PWKPhJ_G0030753	Zfp420	97	56.897	MGP_PWKPhJ_G0029981	Zfp637	75	54.167
MGP_PWKPhJ_G0030753	Zfp420	100	54.023	MGP_PWKPhJ_G0032485	Zfp709	91	54.428
MGP_PWKPhJ_G0030753	Zfp420	98	48.596	MGP_PWKPhJ_G0032486	Zfp882	85	49.684
MGP_PWKPhJ_G0030753	Zfp420	98	60.656	MGP_PWKPhJ_G0021012	Zfp251	74	60.656
MGP_PWKPhJ_G0030753	Zfp420	98	56.182	MGP_PWKPhJ_G0019737	Zfp748	93	56.182
MGP_PWKPhJ_G0030753	Zfp420	98	52.151	MGP_PWKPhJ_G0017480	Zfp867	82	52.151
MGP_PWKPhJ_G0030753	Zfp420	97	37.805	MGP_PWKPhJ_G0025843	Zfp64	69	36.247
MGP_PWKPhJ_G0030753	Zfp420	98	47.059	MGP_PWKPhJ_G0023554	Zfp236	80	47.059
MGP_PWKPhJ_G0030753	Zfp420	97	41.080	MGP_PWKPhJ_G0022237	Zscan10	78	40.179
MGP_PWKPhJ_G0030753	Zfp420	99	50.450	MGP_PWKPhJ_G0022233	Zfp945	98	51.220
MGP_PWKPhJ_G0030753	Zfp420	99	56.115	MGP_PWKPhJ_G0031767	Zfp768	51	56.071
MGP_PWKPhJ_G0030753	Zfp420	95	59.016	MGP_PWKPhJ_G0025379	Zfp661	72	59.016
MGP_PWKPhJ_G0030753	Zfp420	99	36.677	MGP_PWKPhJ_G0030622	Zfp574	93	35.654