EuRBPDB

Description

Ensembl ID: MGP_PWKPhJ_G0030975 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp70
Alias: 2700022N21Rik|3200002N22Rik|AI325098|R74807|Rnu1p70|Rnulp70|Snrp70|Snrp70 {ECO:0000313|EMBL:EDL22845.1,GN ECO:0000313|MGI:MGI:98341}|Srnp70|U1-70|U1-70K
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 22225 bases
Position: chr7:37798315-37820539
Accession: 98341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0083328	RRM_1	PF00076.22	1.1e-17	1	1
MGP_PWKPhJ_P0083338	RRM_1	PF00076.22	4.1e-13	1	1
MGP_PWKPhJ_P0083330	RRM_1	PF00076.22	2.2e-08	1	1
MGP_PWKPhJ_P0083340	U1snRNP70_N	PF12220.8	5.6e-29	1	1
MGP_PWKPhJ_P0083338	U1snRNP70_N	PF12220.8	1.5e-28	1	1
MGP_PWKPhJ_P0083328	U1snRNP70_N	PF12220.8	2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0083343	-	579	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083342	-	1898	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083341	-	212	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083340	-	620	-	MGP_PWKPhJ_P0083340	109 (aa)	-	-
MGP_PWKPhJ_T0083336	-	620	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083337	-	616	-	MGP_PWKPhJ_P0083337	111 (aa)	-	-
MGP_PWKPhJ_T0083334	-	2922	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083335	-	733	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083332	-	3038	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083333	-	707	-	MGP_PWKPhJ_P0083333	115 (aa)	-	-
MGP_PWKPhJ_T0083330	-	451	-	MGP_PWKPhJ_P0083330	86 (aa)	-	-
MGP_PWKPhJ_T0083331	-	4011	-	-	- (aa)	-	-
MGP_PWKPhJ_T0083329	-	1262	-	MGP_PWKPhJ_P0083329	357 (aa)	-	-
MGP_PWKPhJ_T0083328	-	1738	XM_006540732	MGP_PWKPhJ_P0083328	449 (aa)	XP_006540795	Q62376
MGP_PWKPhJ_T0083338	-	618	-	MGP_PWKPhJ_P0083338	168 (aa)	-	-
MGP_PWKPhJ_T0083339	-	605	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0030975	Snrnp70	52	35.000	MGP_PWKPhJ_G0015173	Boll	58	32.911
MGP_PWKPhJ_G0030975	Snrnp70	70	46.667	MGP_PWKPhJ_G0028914	Snrnp35	64	48.718