EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0031259 (Gene tree)
Gene ID: -
Gene Symbol: Rab30
Alias: 5033421K01Rik|AI323892|Rsb30
Full Name: RAB30%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 88887 bases
Position: chr7:84426462-84515348
Accession: 1923235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0084533	MMR_HSR1	PF01926.23	2.4e-05	1	1
MGP_PWKPhJ_P0084534	MMR_HSR1	PF01926.23	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0084535	-	1304	-	MGP_PWKPhJ_P0084535	175 (aa)	-	-
MGP_PWKPhJ_T0084534	-	1406	-	MGP_PWKPhJ_P0084534	203 (aa)	-	-
MGP_PWKPhJ_T0084533	-	2038	XM_006508293	MGP_PWKPhJ_P0084533	203 (aa)	XP_006508356	Q923S9

Gene Model

Click here to download MGP_PWKPhJ_G0031259's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0031259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0031259	Rab30	81	33.735	MGP_PWKPhJ_G0033871	Mras	79	33.735
MGP_PWKPhJ_G0031259	Rab30	81	32.317	MGP_PWKPhJ_G0030381	Rasl2-9	75	32.317
MGP_PWKPhJ_G0031259	Rab30	95	38.889	MGP_PWKPhJ_G0034923	Rab9	91	38.889
MGP_PWKPhJ_G0031259	Rab30	80	42.331	MGP_PWKPhJ_G0025872	Rab22a	84	42.331
MGP_PWKPhJ_G0031259	Rab30	75	41.139	MGP_PWKPhJ_G0029808	Rab7	91	45.833
MGP_PWKPhJ_G0031259	Rab30	79	39.157	MGP_PWKPhJ_G0034766	Rab9b	82	39.157
MGP_PWKPhJ_G0031259	Rab30	79	34.756	MGP_PWKPhJ_G0021239	Rabl2	70	34.756
MGP_PWKPhJ_G0031259	Rab30	89	40.556	MGP_PWKPhJ_G0024594	Rab14	91	43.478
MGP_PWKPhJ_G0031259	Rab30	97	37.981	MGP_PWKPhJ_G0033651	Rab11a	91	44.604
MGP_PWKPhJ_G0031259	Rab30	86	43.678	MGP_PWKPhJ_G0022839	Rab5a	81	43.678
MGP_PWKPhJ_G0031259	Rab30	78	48.447	MGP_PWKPhJ_G0034524	Rab39b	76	48.447
MGP_PWKPhJ_G0031259	Rab30	87	33.146	MGP_PWKPhJ_G0030278	Kras	93	33.146
MGP_PWKPhJ_G0031259	Rab30	84	45.614	MGP_PWKPhJ_G0020303	Rab2b	81	48.718
MGP_PWKPhJ_G0031259	Rab30	82	50.000	MGP_PWKPhJ_G0023645	Rab1b	83	50.000
MGP_PWKPhJ_G0031259	Rab30	97	41.546	MGP_PWKPhJ_G0026295	Rab25	96	41.546
MGP_PWKPhJ_G0031259	Rab30	79	42.857	MGP_PWKPhJ_G0031319	Rab6a	77	42.857
MGP_PWKPhJ_G0031259	Rab30	80	48.466	MGP_PWKPhJ_G0018439	Rab37	75	48.466
MGP_PWKPhJ_G0031259	Rab30	89	47.253	MGP_PWKPhJ_G0022939	Rab12	74	47.778
MGP_PWKPhJ_G0031259	Rab30	76	42.857	MGP_PWKPhJ_G0022930	Rab31	79	42.857
MGP_PWKPhJ_G0031259	Rab30	86	42.529	MGP_PWKPhJ_G0018926	Rab15	82	42.529
MGP_PWKPhJ_G0031259	Rab30	81	47.059	MGP_PWKPhJ_G0026098	Rab33b	74	47.059
MGP_PWKPhJ_G0031259	Rab30	82	31.737	MGP_PWKPhJ_G0028189	Rheb	88	31.737
MGP_PWKPhJ_G0031259	Rab30	90	42.391	MGP_PWKPhJ_G0026914	Rab2a	87	42.391
MGP_PWKPhJ_G0031259	Rab30	81	51.176	MGP_PWKPhJ_G0034357	Rab33a	72	51.176
MGP_PWKPhJ_G0031259	Rab30	83	47.929	MGP_PWKPhJ_G0023083	Rab18	82	47.929
MGP_PWKPhJ_G0031259	Rab30	78	38.272	MGP_PWKPhJ_G0016465	Rab36	61	38.272
MGP_PWKPhJ_G0031259	Rab30	82	50.602	MGP_PWKPhJ_G0017160	Rab1a	81	50.602
MGP_PWKPhJ_G0031259	Rab30	79	41.615	MGP_PWKPhJ_G0033895	Rab6b	77	41.615
MGP_PWKPhJ_G0031259	Rab30	97	39.524	MGP_PWKPhJ_G0022511	Rab11b	96	39.524
MGP_PWKPhJ_G0031259	Rab30	89	34.426	MGP_PWKPhJ_G0031945	Hras	94	34.426
MGP_PWKPhJ_G0031259	Rab30	83	42.012	MGP_PWKPhJ_G0018235	Rab5c	78	42.012
MGP_PWKPhJ_G0031259	Rab30	77	35.625	MGP_PWKPhJ_G0017846	Rab34	62	35.625
MGP_PWKPhJ_G0031259	Rab30	87	37.500	MGP_PWKPhJ_G0015037	Rab23	74	37.500