EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0031319 (Gene tree)
Gene ID: -
Gene Symbol: Rab6a
Alias: 2610028L11Rik|AA419671|Rab6|Rab6 {ECO:0000313|EMBL:EDL16462.1,GN ECO:0000313|MGI:MGI:894313}|Rab6 {ECO:0000313|EMBL:EDL16464.1,GN ECO:0000313|MGI:MGI:894313}|Rab6A
Full Name: RAB6A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Plus strand
Length: 34520 bases
Position: chr7:92345166-92379685
Accession: 894313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0084788	MMR_HSR1	PF01926.23	9.3e-05	1	1
MGP_PWKPhJ_P0084789	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0084788	-	3261	-	MGP_PWKPhJ_P0084788	208 (aa)	-	-
MGP_PWKPhJ_T0084789	-	3157	-	MGP_PWKPhJ_P0084789	208 (aa)	-	-
MGP_PWKPhJ_T0084787	-	2614	-	MGP_PWKPhJ_P0084787	175 (aa)	-	P35279
MGP_PWKPhJ_T0084790	-	567	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0031319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0031319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0031319	Rab6a	79	33.721	MGP_PWKPhJ_G0034766	Rab9b	84	33.721
MGP_PWKPhJ_G0031319	Rab6a	84	44.000	MGP_PWKPhJ_G0018235	Rab5c	81	44.000
MGP_PWKPhJ_G0031319	Rab6a	94	36.232	MGP_PWKPhJ_G0024594	Rab14	95	36.232
MGP_PWKPhJ_G0031319	Rab6a	94	35.784	MGP_PWKPhJ_G0026098	Rab33b	86	35.784
MGP_PWKPhJ_G0031319	Rab6a	81	39.053	MGP_PWKPhJ_G0025872	Rab22a	87	39.053
MGP_PWKPhJ_G0031319	Rab6a	77	40.828	MGP_PWKPhJ_G0020303	Rab2b	79	43.421
MGP_PWKPhJ_G0031319	Rab6a	76	39.873	MGP_PWKPhJ_G0015037	Rab23	66	39.873
MGP_PWKPhJ_G0031319	Rab6a	75	39.623	MGP_PWKPhJ_G0034524	Rab39b	75	39.623
MGP_PWKPhJ_G0031319	Rab6a	93	35.000	MGP_PWKPhJ_G0034923	Rab9	90	35.000
MGP_PWKPhJ_G0031319	Rab6a	77	42.857	MGP_PWKPhJ_G0018439	Rab37	75	42.857
MGP_PWKPhJ_G0031319	Rab6a	95	38.049	MGP_PWKPhJ_G0034357	Rab33a	86	38.049
MGP_PWKPhJ_G0031319	Rab6a	100	90.865	MGP_PWKPhJ_G0033895	Rab6b	100	90.865
MGP_PWKPhJ_G0031319	Rab6a	90	36.458	MGP_PWKPhJ_G0018926	Rab15	91	36.458
MGP_PWKPhJ_G0031319	Rab6a	84	35.955	MGP_PWKPhJ_G0033651	Rab11a	84	38.281
MGP_PWKPhJ_G0031319	Rab6a	85	37.634	MGP_PWKPhJ_G0017846	Rab34	72	37.634
MGP_PWKPhJ_G0031319	Rab6a	77	42.857	MGP_PWKPhJ_G0031259	Rab30	79	42.857
MGP_PWKPhJ_G0031319	Rab6a	94	32.068	MGP_PWKPhJ_G0029808	Rab7	90	50.704
MGP_PWKPhJ_G0031319	Rab6a	75	35.625	MGP_PWKPhJ_G0028189	Rheb	85	35.625
MGP_PWKPhJ_G0031319	Rab6a	94	38.384	MGP_PWKPhJ_G0017160	Rab1a	94	38.384
MGP_PWKPhJ_G0031319	Rab6a	91	38.462	MGP_PWKPhJ_G0026914	Rab2a	89	38.462
MGP_PWKPhJ_G0031319	Rab6a	80	38.922	MGP_PWKPhJ_G0022930	Rab31	86	38.922
MGP_PWKPhJ_G0031319	Rab6a	76	40.252	MGP_PWKPhJ_G0022939	Rab12	65	40.252
MGP_PWKPhJ_G0031319	Rab6a	77	30.769	MGP_PWKPhJ_G0029192	Rasl11a	69	30.769
MGP_PWKPhJ_G0031319	Rab6a	88	34.239	MGP_PWKPhJ_G0026295	Rab25	86	34.239
MGP_PWKPhJ_G0031319	Rab6a	95	30.151	MGP_PWKPhJ_G0031945	Hras	98	30.151
MGP_PWKPhJ_G0031319	Rab6a	94	36.150	MGP_PWKPhJ_G0016465	Rab36	80	36.150
MGP_PWKPhJ_G0031319	Rab6a	93	38.384	MGP_PWKPhJ_G0023645	Rab1b	96	38.384
MGP_PWKPhJ_G0031319	Rab6a	88	31.915	MGP_PWKPhJ_G0021239	Rabl2	83	31.915
MGP_PWKPhJ_G0031319	Rab6a	75	38.217	MGP_PWKPhJ_G0022511	Rab11b	72	38.217
MGP_PWKPhJ_G0031319	Rab6a	76	32.500	MGP_PWKPhJ_G0033871	Mras	76	32.500
MGP_PWKPhJ_G0031319	Rab6a	98	41.546	MGP_PWKPhJ_G0022839	Rab5a	95	41.546
MGP_PWKPhJ_G0031319	Rab6a	95	36.634	MGP_PWKPhJ_G0023083	Rab18	94	36.634
MGP_PWKPhJ_G0031319	Rab6a	75	32.278	MGP_PWKPhJ_G0030278	Kras	83	32.278