EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0031760 (Gene tree)
Gene ID: -
Gene Symbol: Sept1
Alias: Diff6|PNUTL3|Pnutl3
Full Name: septin 1
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 19503 bases
Position: chr7:119026215-119045717
Accession: 1858916
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0086274	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_PWKPhJ_P0086273	MMR_HSR1	PF01926.23	3.6e-08	1	1
MGP_PWKPhJ_P0086271	MMR_HSR1	PF01926.23	5.2e-08	1	1
MGP_PWKPhJ_P0086269	MMR_HSR1	PF01926.23	5.3e-08	1	1
MGP_PWKPhJ_P0086270	MMR_HSR1	PF01926.23	8.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0086270	-	1284	-	MGP_PWKPhJ_P0086270	338 (aa)	-	-
MGP_PWKPhJ_T0086271	-	1048	-	MGP_PWKPhJ_P0086271	328 (aa)	-	-
MGP_PWKPhJ_T0086272	-	789	-	-	- (aa)	-	-
MGP_PWKPhJ_T0086273	-	706	-	MGP_PWKPhJ_P0086273	186 (aa)	-	-
MGP_PWKPhJ_T0086274	-	599	-	MGP_PWKPhJ_P0086274	145 (aa)	-	-
MGP_PWKPhJ_T0086275	-	821	-	-	- (aa)	-	-
MGP_PWKPhJ_T0086276	-	242	-	-	- (aa)	-	-
MGP_PWKPhJ_T0086277	-	712	-	-	- (aa)	-	-
MGP_PWKPhJ_T0086269	-	1480	-	MGP_PWKPhJ_P0086269	366 (aa)	-	-
MGP_PWKPhJ_T0086268	-	570	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0031760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0031760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0031760	Sept1	100	68.276	MGP_PWKPhJ_G0021618	Sept5	93	63.068
MGP_PWKPhJ_G0031760	Sept1	100	47.260	MGP_PWKPhJ_G0021479	Sept12	77	43.775
MGP_PWKPhJ_G0031760	Sept1	100	50.685	MGP_PWKPhJ_G0021139	Sept3	86	46.575
MGP_PWKPhJ_G0031760	Sept1	100	38.095	MGP_PWKPhJ_G0017389	Sept8	76	36.765
MGP_PWKPhJ_G0031760	Sept1	100	40.136	MGP_PWKPhJ_G0034308	Sept6	76	41.349
MGP_PWKPhJ_G0031760	Sept1	100	50.000	MGP_PWKPhJ_G0018514	Sept9	83	46.000
MGP_PWKPhJ_G0031760	Sept1	100	66.897	MGP_PWKPhJ_G0017985	Sept4	99	64.516
MGP_PWKPhJ_G0031760	Sept1	100	40.816	MGP_PWKPhJ_G0028586	Sept11	76	40.762
MGP_PWKPhJ_G0031760	Sept1	100	59.310	MGP_PWKPhJ_G0033206	Sept7	76	49.709
MGP_PWKPhJ_G0031760	Sept1	100	43.537	MGP_PWKPhJ_G0016368	Sept10	71	40.064
MGP_PWKPhJ_G0031760	Sept1	100	64.828	MGP_PWKPhJ_G0015477	Sept2	100	60.748