EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_PWKPhJ_G0032278 (Gene tree)
Gene ID
-
Gene Symbol
Cnot7
Alias
AU022737|CAF-1|Caf1|Pop2
Full Name
CCR4-NOT transcription complex%2C subunit 7
Gene Type
protein_coding
Species
Mus_musculus_pwkphj
Status
putative
Strand
Minus strand
Length
23634 bases
Position
chr8:37194474-37218107
Accession
1298230
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_PWKPhJ_P0088196CAF1PF04857.203.5e-2212
MGP_PWKPhJ_P0088196CAF1PF04857.203.5e-2222
MGP_PWKPhJ_P0088197CAF1PF04857.203.5e-2212
MGP_PWKPhJ_P0088197CAF1PF04857.203.5e-2222
MGP_PWKPhJ_P0088200CAF1PF04857.203.5e-2212
MGP_PWKPhJ_P0088200CAF1PF04857.203.5e-2222
MGP_PWKPhJ_P0088199CAF1PF04857.206.2e-1912
MGP_PWKPhJ_P0088199CAF1PF04857.206.2e-1922
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_PWKPhJ_T0088208-406--- (aa)--
MGP_PWKPhJ_T0088203-840--- (aa)--
MGP_PWKPhJ_T0088202-679--- (aa)--
MGP_PWKPhJ_T0088201-610-MGP_PWKPhJ_P0088201179 (aa)--
MGP_PWKPhJ_T0088200-2987-MGP_PWKPhJ_P0088200285 (aa)--
MGP_PWKPhJ_T0088207-484--- (aa)--
MGP_PWKPhJ_T0088206-726--- (aa)--
MGP_PWKPhJ_T0088205-312--- (aa)--
MGP_PWKPhJ_T0088199-2462-MGP_PWKPhJ_P0088199248 (aa)--
MGP_PWKPhJ_T0088198-3829--- (aa)--
MGP_PWKPhJ_T0088197-2543-MGP_PWKPhJ_P0088197285 (aa)--
MGP_PWKPhJ_T0088196-2616XM_006509306MGP_PWKPhJ_P0088196285 (aa)XP_006509369Q60809
Gene Model
Click here to download MGP_PWKPhJ_G0032278's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0032278's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_PWKPhJ_G0032278Cnot79976.596MGP_PWKPhJ_G0017431Cnot89776.596

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us