EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0032421 (Gene tree)
Gene ID: -
Gene Symbol: Ddx49
Alias: R27090_2
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 49
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 9847 bases
Position: chr8:66701715-66711561
Accession: 2136689
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0088725	ResIII	PF04851.15	4.3e-06	1	1
MGP_PWKPhJ_P0088725	DEAD	PF00270.29	7.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0088728	-	1101	-	MGP_PWKPhJ_P0088728	354 (aa)	-	-
MGP_PWKPhJ_T0088729	-	1441	-	-	- (aa)	-	-
MGP_PWKPhJ_T0088725	-	2137	-	MGP_PWKPhJ_P0088725	480 (aa)	-	Q4FZF3
MGP_PWKPhJ_T0088726	-	2163	-	-	- (aa)	-	-
MGP_PWKPhJ_T0088727	-	599	-	-	- (aa)	-	-
MGP_PWKPhJ_T0088730	-	304	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_PWKPhJ_G0032421's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0032421's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0032421	Ddx49	97	49.271	MGP_PWKPhJ_G0030210	Ddx47	95	45.824
MGP_PWKPhJ_G0032421	Ddx49	95	30.532	MGP_PWKPhJ_G0018547	Eif4a3	91	31.156
MGP_PWKPhJ_G0032421	Ddx49	92	33.238	MGP_PWKPhJ_G0028916	Ddx55	58	33.056
MGP_PWKPhJ_G0032421	Ddx49	91	39.521	MGP_PWKPhJ_G0021078	Ddx17	56	37.903
MGP_PWKPhJ_G0032421	Ddx49	59	33.175	MGP_PWKPhJ_G0017114	Ddx56	94	32.627
MGP_PWKPhJ_G0032421	Ddx49	93	30.175	MGP_PWKPhJ_G0028709	Ddx51	71	30.573
MGP_PWKPhJ_G0032421	Ddx49	63	30.131	MGP_PWKPhJ_G0032847	Ddx19b	63	30.131
MGP_PWKPhJ_G0032421	Ddx49	98	32.741	MGP_PWKPhJ_G0024477	Ddx31	63	31.136
MGP_PWKPhJ_G0032421	Ddx49	95	33.138	MGP_PWKPhJ_G0015676	Ddx59	58	32.609
MGP_PWKPhJ_G0032421	Ddx49	97	35.211	MGP_PWKPhJ_G0018382	Ddx5	76	34.062
MGP_PWKPhJ_G0032421	Ddx49	95	34.454	MGP_PWKPhJ_G0019950	Ddx4	52	34.474
MGP_PWKPhJ_G0032421	Ddx49	97	33.333	MGP_PWKPhJ_G0032559	Ddx39	87	33.156
MGP_PWKPhJ_G0032421	Ddx49	93	34.897	MGP_PWKPhJ_G0033770	Ddx43	60	34.913
MGP_PWKPhJ_G0032421	Ddx49	92	34.625	MGP_PWKPhJ_G0015548	Ddx18	59	33.333
MGP_PWKPhJ_G0032421	Ddx49	92	32.687	MGP_PWKPhJ_G0032787	Ddx28	68	31.926
MGP_PWKPhJ_G0032421	Ddx49	97	38.286	MGP_PWKPhJ_G0025819	Ddx27	59	33.696
MGP_PWKPhJ_G0032421	Ddx49	96	33.333	MGP_PWKPhJ_G0019621	Ddx41	62	32.921
MGP_PWKPhJ_G0032421	Ddx49	96	40.909	MGP_PWKPhJ_G0018674	Ddx1	63	40.909
MGP_PWKPhJ_G0032421	Ddx49	97	33.046	MGP_PWKPhJ_G0022604	Ddx39b	99	36.667
MGP_PWKPhJ_G0032421	Ddx49	76	30.081	MGP_PWKPhJ_G0017941	Ddx52	61	30.081
MGP_PWKPhJ_G0032421	Ddx49	94	32.239	MGP_PWKPhJ_G0021677	Eif4a2	95	31.353
MGP_PWKPhJ_G0032421	Ddx49	94	31.232	MGP_PWKPhJ_G0017628	Eif4a1	92	31.726
MGP_PWKPhJ_G0032421	Ddx49	90	37.500	MGP_PWKPhJ_G0016052	D1Pas1	55	36.316