EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_PWKPhJ_G0032644 (Gene tree)
Gene ID: -
Gene Symbol: Sall1
Alias: Msal-3
Full Name: sal-like 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_pwkphj
Status: putative
Strand: Minus strand
Length: 18602 bases
Position: chr8:85467162-85485763
Accession: 1889585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_PWKPhJ_P0089481	zf-C2H2	PF00096.26	8.3e-34	1	6
MGP_PWKPhJ_P0089481	zf-C2H2	PF00096.26	8.3e-34	2	6
MGP_PWKPhJ_P0089481	zf-C2H2	PF00096.26	8.3e-34	3	6
MGP_PWKPhJ_P0089481	zf-C2H2	PF00096.26	8.3e-34	4	6
MGP_PWKPhJ_P0089481	zf-C2H2	PF00096.26	8.3e-34	5	6
MGP_PWKPhJ_P0089481	zf-C2H2	PF00096.26	8.3e-34	6	6
MGP_PWKPhJ_P0089481	zf-met	PF12874.7	1.6e-24	1	5
MGP_PWKPhJ_P0089481	zf-met	PF12874.7	1.6e-24	2	5
MGP_PWKPhJ_P0089481	zf-met	PF12874.7	1.6e-24	3	5
MGP_PWKPhJ_P0089481	zf-met	PF12874.7	1.6e-24	4	5
MGP_PWKPhJ_P0089481	zf-met	PF12874.7	1.6e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_PWKPhJ_T0089482	-	4026	-	MGP_PWKPhJ_P0089482	1194 (aa)	-	-
MGP_PWKPhJ_T0089481	-	5255	XM_006531238	MGP_PWKPhJ_P0089481	1324 (aa)	XP_006531301	Q6P5E3

Gene Model

Click here to download MGP_PWKPhJ_G0032644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_PWKPhJ_G0032644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_PWKPhJ_G0032644	Sall1	99	63.462	MGP_PWKPhJ_G0023551	Sall3	99	65.306
MGP_PWKPhJ_G0032644	Sall1	67	53.704	MGP_PWKPhJ_G0023554	Zfp236	90	50.000
MGP_PWKPhJ_G0032644	Sall1	95	64.706	MGP_PWKPhJ_G0025842	Sall4	100	64.706